Stenotrophomonas indicatrix: DAIF1_04660
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Entry
DAIF1_04660 CDS
T07128
Symbol
pdeB
Name
(GenBank) putative cyclic di-GMP phosphodiesterase PdeB
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DAIF1_04660 (pdeB)
Enzymes [BR:
sinc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DAIF1_04660 (pdeB)
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GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
QBR42939
LinkDB
All DBs
Position
complement(511634..513253)
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AA seq
539 aa
AA seq
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MSRLRVIIGGTVLAVLAAAVPIAVMVYATWDRAVSVEQQRLHAIAERSLRRTEVSYQEAL
AALKSAEATVLPPCGAEHIQRMQTLVMTTPSSDQMGYFEGGKLRCTSWGPFQQDVDQPTP
DHVTSDGAGITVNVRPEAAGRRPMLSMMYGSYDVLVDPRRFVDVIVDPDVRLALASPDGR
LLTQQDGMDPALLQRLLREPGEGLDRDTLYASARSGEWLAIATAPRTALAATFRQQAWLF
VPLGLLMAAAGAGLVIWLSRRRLSMRGELGIAIRRRELYLHYQPIIELDTGICVGAEALV
RWQRPDGTQVRPDLFIPLAEEAGMIAAITDLVIENVVADMRELLAEDRSAHIAINLAAED
ISSGRALKVISQRMAGSGILPQQIWLEATEHGFLDIDRARTMLAAARRAGHSVAIDDFGV
GYSSLQYLQQLPLDALKIDKSFVDAIGTESATSPVTPHIIGMARELGLWVVAEGVETEAQ
LAYLHSQHVQFGQGWLFSRPLPRDEFIAFHRKRQQQYGAAREHMQNPRSVPFEREQAGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagccgactgcgggtcatcatcggcggcaccgtcctggccgtgctggccgctgcagtg
ccgatcgcggtcatggtctatgccacctgggaccgtgccgtaagtgtcgaacagcagcgg
ctgcatgccatcgccgagcgcagcctgcgccgtaccgaagtgtcctaccaggaagcactg
gcggcattgaagtcggccgaggccaccgtgctgccgccctgcggggccgaacacatccag
cgcatgcagaccctggtgatgaccacgccgtcgtcggaccagatgggctacttcgagggc
ggcaagctgcgctgcacgtcgtgggggccgttccagcaggatgtggaccagcccacgccg
gaccacgtcaccagcgatggtgccggcatcaccgtcaacgtgcgccccgaggcggctggc
cggcggccgatgctgtccatgatgtacgggtcctatgacgtgctggtcgaccctcggcgc
ttcgtcgacgtcatcgtcgatccggacgtgcggctggccctggcaagtccggatggacgg
ctgctgacccagcaggacggcatggacccggccctgctgcagcgcctgctgcgtgagccc
ggcgagggcctggaccgcgacaccctgtatgccagcgcgcgcagcggtgaatggctggca
atcgccacggcgccgcgcaccgcgctggcggccacgttccggcagcaggcgtggctgttc
gtgcccttgggcctgctgatggccgccgccggtgccggtctggtgatctggctgtcgcga
cgacggctgtcgatgcgcggcgaactgggcatcgccatccgccgccgcgaactctacctg
cactaccagcccatcatcgaactggacaccggcatctgcgtcggcgccgaagcgctggtg
cgctggcagcgccccgacggcacgcaggtgcgtccggacctgttcattcccttggccgaa
gaagccggaatgatcgccgccatcaccgacctggtgatcgagaacgtggttgccgacatg
cgtgagctgctggccgaggatcgcagtgcacacatcgcgatcaacctggcggccgaggac
atcagcagcggacgtgcgctgaaggtgatctcgcagcgcatggccggcagcggcatcctg
ccgcagcagatctggctggaggccaccgaacatggcttcctcgacatcgaccgtgcacgc
accatgctggctgcggcgcggcgcgcgggccacagcgtggccatcgatgatttcggtgtc
ggctattccagcctgcagtacctgcagcagctgccgctggatgcactgaagatcgacaag
tccttcgtcgatgcgatcggcaccgaaagcgcgaccagcccggtcacgccgcacatcatc
ggcatggcccgcgagctgggcctgtgggtggtggccgaaggtgtggaaaccgaagcgcag
ctggcctacctgcacagccagcacgtgcagttcggccagggctggctgttctcgcggccg
ttgccgcgcgatgagttcatcgccttccaccgcaagcgccagcagcagtacggcgcggcg
cgggagcacatgcagaatccgcgcagcgtgccgttcgagcgcgagcaggcgggggagtag
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