Stenotrophomonas indicatrix: DAIF1_05100
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Entry
DAIF1_05100 CDS
T07128
Symbol
rsmC
Name
(GenBank) ribosomal RNA small subunit methyltransferase C
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinc03009
]
DAIF1_05100 (rsmC)
Enzymes [BR:
sinc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
DAIF1_05100 (rsmC)
Ribosome biogenesis [BR:
sinc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DAIF1_05100 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_11
MTS_N
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QBR42983
LinkDB
All DBs
Position
558089..559159
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AA seq
356 aa
AA seq
DB search
MASSDDAPLQTLFLPLSSGALRWPEGPVAFLRARDGWPLREQAGGREVDCEQSFAPFAQP
LQQAAGWTVSGQLDDVAGRGRYPLVLVLPPRQREEARALFARALALVAEGGRIVACQHNN
EGARSGEGDLKQLAGLGGSLTKNHCRVFWTAPLQGQHDVDVAKRWGALDAVRPIVGGRFL
SRPGVFAWDRIDPASALLAEHLPADLAGRAADLGAGYGYLSRELLERCPKITALDLYEAE
KRALDLAELNLAPPPRPVPLRFLWRDVTAGIEPDYDVIISNPPFHTPSRADRPDIGQRFI
AVAAQALRPGGRLYVVANRHLPYEYTLNESFGAVRVVAERDGFKLVEAVKGKGKGR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagcgacgacgcccccctgcagaccctgttcctgccgttgtccagcggcgcc
ctgcgctggccggagggcccggtggccttcctgcgcgcccgtgacggctggccactgcgc
gagcaggccggcggccgcgaagtcgactgcgagcagagcttcgccccgttcgcgcagccg
ctgcagcaggccgctggctggaccgtcagcgggcagctggatgatgttgccggccgcggc
cgttacccgctggtgctggtgctgccgccgcgccagcgcgaggaagcccgcgcgctgttc
gcccgcgccctggcgctggtcgccgagggtggccgcatcgtggcctgccagcacaacaac
gaaggtgcccgctccggcgaaggcgacctcaagcagctggccggcctcggcggcagcctg
accaagaaccactgccgcgtgttctggaccgctccgctgcagggccagcacgatgtggac
gtagccaagcgctggggcgcgctggacgcggtgcggccgatcgtcggcggccgtttcctc
agccgtccgggcgtgttcgcctgggaccgcatcgacccggcgtcggccctgctggccgag
catctgccggccgacctggccgggcgtgcagctgacctcggtgccggttacggctacctg
tcgcgtgaactgctggagcgctgcccgaagatcaccgcgctggacctgtacgaggccgag
aagcgcgcgctggacctggccgaactcaatctggcgccgccaccgcgccccgtgccgctg
cgcttcctgtggcgcgacgtcaccgccggtatcgagccggactacgacgtcatcatcagc
aacccgccgttccacacgccctcgcgtgcggatcgcccggacatcggccagcgcttcatc
gccgtggccgcgcaggcgctgcgcccgggtgggcgcctgtacgtggtggccaaccgccac
ctgccctacgagtacacgctcaacgagagcttcggcgcggtgcgcgtggttgccgagcgc
gatggcttcaagctggtcgaagcggtgaagggcaaggggaagggccggtga
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