Stenotrophomonas indicatrix: DAIF1_05960
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Entry
DAIF1_05960 CDS
T07128
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DAIF1_05960 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sinc01007
]
DAIF1_05960 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinc03016
]
DAIF1_05960 (valS)
Enzymes [BR:
sinc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
DAIF1_05960 (valS)
Amino acid related enzymes [BR:
sinc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DAIF1_05960 (valS)
Transfer RNA biogenesis [BR:
sinc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DAIF1_05960 (valS)
Prokaryotic type
DAIF1_05960 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
QBR43069
LinkDB
All DBs
Position
complement(656281..659139)
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AA seq
952 aa
AA seq
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MTQLASSYDPKSFETDLYEAWEKAGHFKPSGKGEPYTILLPPPNVTGTLHMGHAFQQTLM
DALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNLALEGNGETRDSLGREGFIGKVWEWK
QQSGDIIERQMRRLGTSADWSRSTFTMDPQPSEAVIEAFVRWHEQGLIYRGQRLVNWDPV
LKTAISDLEVESAEEEGFLWSIAYQLDEGLSYEHVERDADGVETLRETRDYLVVATTRPE
TLLGDTAVMVHPEDERYLHLIGKSVVLPLTGRRVPVIADDYVDRAFGTGVVKVTPAHDFN
DYQVGVRHSLPMINLFTPVAAINDNAPERFQGLDRYDARKAVLAELEDLGILVETKAHKL
QVPRGDRTGQVIEPYLTDQWFVKMDELAKRGLELVEGTDGKPGSISFVPPNWINTYRHWM
TNIQDWCISRQLWWGHRIPAWFDAATGSCYVGRSEDEVRAKNNLGSDVVLSQESDVLETW
FSSQLWPFSTLGWPNEQAMAERGFDRYLPSSVLITGFDIIFFWVARMIMATDNLTGKIPF
KDVYFTGLIRDGQGQKMSKSKGNVLDPLDIIDGITIDDLVAKRTGGLMQPRMVEKIEKAT
RKEFPDGIAAHGADALRFTIAALATHGRDIKFDMNRAEGYKNFCNKLWNASRFTLMNTEG
AAFTGVPTPRTDAERWILSRLAATTAEAQGHFAAYRFDLLAQCLYEFAWNEFCDWFLELS
KPALNGADAADADSTRHTLLYVLEALLRLLHPLTPFITEQLWQQLAPRLGLAETTLSLRP
YPTAAEFEGDFTQAEADVEWLKAVISAVRRVRSELNVAPSRLVPLRLLAGQEHAGQSQDR
ARIERFSASLSFLLKLDSIQWLADAQSAPPAAAAIVGELKLLVPLEGLVDLDAERARLDK
EIKRVEGEQEKSETKLAKFSDKVPPAVIEQERVRLVDWNNQLAGLREQRAKL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgacccaactcgcctccagctacgacccgaagtccttcgagaccgacctctacgaggcc
tgggagaaggccggccatttcaagccgtccggcaagggcgagccgtacaccatcctgctg
ccgccgccgaacgtgaccggcaccctgcacatgggccatgccttccagcagaccctgatg
gatgcgctggtgcgctaccaccgcatgcgcggctacgacacgttgtggcaagtcggtacc
gaccacgccggcatcgccaccgagatggtggtcagccgcaacctggcgctggaaggcaac
ggcgagacccgcgattcgctgggccgcgagggcttcatcggcaaggtgtgggagtggaag
cagcagtccggtgacatcatcgaacggcagatgcgccgcctgggcacgtctgccgactgg
tcgcgcagcaccttcaccatggacccgcagccgtccgaagcggtgatcgaagccttcgtg
cgctggcatgagcagggcctgatctaccgtggccagcgcctggtcaactgggatccggtg
ctgaagacggcgatctcggacctggaagtggagagcgccgaggaagagggtttcctgtgg
tcgatcgcctaccagctggatgaaggcctgagctacgagcacgtcgagcgcgatgccgac
ggcgtcgaaaccctgcgcgaaacccgcgattacctggtggtcgccaccacccgcccggaa
accctgctgggcgacaccgcggtgatggtgcatccggaagacgagcgttacctgcacctg
atcggcaagagcgtggtgctgccgctgaccggccgccgcgtgccggtgatcgccgatgac
tacgtggaccgtgcgttcggtaccggcgtggtcaaggtcaccccggcgcatgacttcaac
gattaccaggtgggcgtgcgccacagcctgccgatgatcaacctgttcacgccggtggcc
gcgatcaacgacaacgcgccggagcgtttccaggggctggaccgttacgacgcgcgcaag
gccgtgctggctgaactggaagacctgggcatcctggtcgagaccaaggcacacaagctg
caggtgccgcgcggcgaccgtaccggccaggtgatcgagccgtacctgaccgaccagtgg
ttcgtgaagatggacgaactggccaagcgtggcctggagctggtcgaaggtaccgatgga
aagccgggcagcatctccttcgtgccgccgaactggatcaacacctaccgccactggatg
accaacatccaggattggtgcatcagccgccagctgtggtggggccaccgcattcccgca
tggttcgatgccgccaccggcagctgctacgtcggccgcagcgaagacgaggtgcgggcg
aaaaacaatctcggcagcgacgtcgtgctgagccaggaaagcgacgtgctggagacctgg
ttctcctcgcagctgtggccgttctccaccctgggctggccgaacgagcaggcgatggcc
gagcgcggtttcgaccgctacctgccgtcgtcggtgctgatcaccggcttcgacatcatc
ttcttctgggtggcgcgcatgatcatggccaccgacaacctgaccgggaagatcccgttc
aaggacgtctacttcaccggcctgatccgcgacggccagggccagaagatgtccaagagc
aagggcaacgtgctcgatccgctggacatcatcgacggcatcaccatcgatgatctggtg
gccaagcgcaccggcgggctgatgcagccgcgcatggtcgagaagatcgagaaggccacg
cgcaaggagttcccggacggcatcgccgcccatggtgccgatgcgctgcgtttcaccatc
gccgcgctggccacccatggccgcgacatcaagttcgacatgaaccgcgccgagggctac
aagaatttctgcaacaagctgtggaacgccagccgcttcactctgatgaacaccgaaggt
gcagcgttcaccggcgtgccgacgccgcggaccgatgccgagcgctggatcctctcgcgc
ctggccgctaccaccgccgaagcgcagggtcatttcgccgcctatcgcttcgacctgttg
gcgcagtgcctgtacgaattcgcctggaacgagttctgcgactggttcctggagctgagc
aagccggcattgaacggcgccgatgccgccgacgccgacagcacccgccacaccctgctg
tacgtgctggaagcgctgctgcgcctgctgcacccgcttactccgttcatcaccgaacag
ctgtggcagcagctggcaccgcgcctgggcctggccgaaaccacgctgtcactgcgcccg
tacccgaccgccgccgaattcgagggcgatttcacccaggccgaggccgacgtggaatgg
ttgaaggcggtaatcagtgcggtgcgccgcgtgcgcagcgagctgaacgtcgccccgtcc
aggctggtgccgctgcgcctgctggccggccaggaacatgccgggcagagccaggaccgc
gcgcgcatcgagcgcttcagcgcttcgctgtcgttcctgctgaagctggacagcatccag
tggctggccgacgcacagagcgcgccgccggccgccgccgcgatcgtcggtgagctgaag
ctgctggtgccgctggaaggcctggttgatctcgatgccgagcgcgcgcgcctggacaag
gagatcaagcgcgtggaaggcgaacaggagaagagcgagaccaagctggccaagttctcc
gacaaggttccgccggcggtgatcgagcaggaacgcgtgcgcctggtcgactggaacaac
cagctggccggcctgcgcgaacagcgcgcgaagctgtaa
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