Stenotrophomonas indicatrix: DAIF1_06370
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Entry
DAIF1_06370 CDS
T07128
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00260
Glycine, serine and threonine metabolism
sinc00460
Cyanoamino acid metabolism
sinc00630
Glyoxylate and dicarboxylate metabolism
sinc00670
One carbon pool by folate
sinc00680
Methane metabolism
sinc01100
Metabolic pathways
sinc01110
Biosynthesis of secondary metabolites
sinc01120
Microbial metabolism in diverse environments
sinc01200
Carbon metabolism
sinc01230
Biosynthesis of amino acids
sinc01240
Biosynthesis of cofactors
sinc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DAIF1_06370 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DAIF1_06370 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DAIF1_06370 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DAIF1_06370 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DAIF1_06370 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DAIF1_06370 (glyA)
Enzymes [BR:
sinc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DAIF1_06370 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QBR43110
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Position
721075..722328
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AA seq
417 aa
AA seq
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MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFDADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIV
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYLEQDCVDLANWIADVLDAPADEAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccatcgcc
gccgaaacccagcgccaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgaacagctggcgatcgac
cgcctcaagcagctgttcgatgcggactacgccaacgtgcagccgcacagcggttcgcag
gccaaccaggccgtgtacttcgcgctgctgcagccgggcgataccatcctcggcatgagc
ctggcccacggcggccacctcacccacggcgccaaggtcaacgcctcgggcaagctgttc
aacgccgtgcaatacggcgtcaacgaccagggcctgatcgattacgacgaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtggccggcttctcggcctactcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcgcacgtcgccggcctggttgctgctggcgtctacccgagcccgctggaacatgca
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtc
gccaagggcgccgacgaagacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcgctg
gagccgggcttcaaggcctaccagcagcaggtggtgaagaacgcgcaggcgatggccaac
acgctcatcgcacgcggctacaagatcgtctccggtggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggacgcggaagctgcgctgggcaaggcc
catatcaccgttaacaagaactcggtgccgaacgacccgcgttcgccgttcgtgacctcg
ggcctgcgcctgggcaccccggcggtgaccacccgcggttacctggaacaggactgcgtg
gacctggccaactggatcgccgacgtgctcgacgccccggccgatgaggccgtgatcgcc
cgcgtgcgtgatgcggtcagcgcgcagtgccgcaagtacccggtctacggttga
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