Stenotrophomonas indicatrix: DAIF1_08580
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Entry
DAIF1_08580 CDS
T07128
Symbol
oprF
Name
(GenBank) outer membrane porin F
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinc02000
]
DAIF1_08580 (oprF)
Transporters [BR:
sinc02000
]
Other transporters
Pores ion channels [TC:
1
]
DAIF1_08580 (oprF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
DUF481
Autotransporter
OprF
DUF6089
DUF3575
TSP_3
Motif
Other DBs
NCBI-ProteinID:
QBR43326
LinkDB
All DBs
Position
957262..958353
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AA seq
363 aa
AA seq
DB search
MNKKILTAALLGGLAFAQAASAQEFDDRWYLTGSAGFNFQDNDRLTNDAPFVTLGLGKFI
SPNWSLDGELNYQNPNFDANQDQNWSQYGVSFDLRRHFIKEGRGWNPYIVGGLGYQKSEE
EYPALDTNGPRERKDGNLAAKLGVGLQTTFDKRVAVRAEVAYRADFDDQSIAARDESWFG
DVLASVGVVIPLGPAPVAAAPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTIGPDG
CPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATEILKRYPDLRVEVAGHTDSKGTDAYNQ
KLSERRATAVYNYLTKNGVDAGRLAGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTELN
VQN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagatccttactgccgcgctgctgggcggtctggctttcgcccaggctgcg
tcggcgcaggagttcgatgaccgctggtacctgaccggttcggccggcttcaacttccag
gacaacgaccgcctgaccaacgacgctccgttcgtgaccctgggtctgggcaagttcatc
agcccgaactggtcgctggatggtgagctgaactaccagaacccgaacttcgacgccaac
caggatcagaactggtcgcagtacggcgtgtcgttcgatctgcgtcgccacttcatcaag
gaaggccgcggctggaacccctacatcgtgggcggcctgggctaccagaagtcggaagaa
gagtacccggctctggacaccaacggtccgcgtgagcgcaaggacggcaacctggctgcc
aagctcggcgtcggcctgcagaccaccttcgacaagcgcgttgctgtccgcgccgaagtg
gcctaccgcgctgacttcgacgaccagagcatcgccgcgcgcgacgaaagctggttcggc
gacgtgctggcttcggtcggcgtcgtgatcccgctgggcccggccccggtggctgctgct
ccggctccggctccggttgccccgagctgcgccgacctggatgacgacggtgacggcgtc
aacaactgcgacgacaagtgcccgaactcgcagccgggtcagaccatcggtccggacggt
tgcccggtgccggtctcgatcgacctgaagggcgtgaacttcgacttcgacaagtcgaac
ctgcgtccggacgctgtggccatcctgagcgaagccaccgagatcctgaagcgttacccg
gatctgcgcgttgaagttgccggtcacaccgactcgaagggtaccgacgcttacaaccag
aagctgtcggagcgtcgtgctaccgcggtgtacaactacctgaccaagaacggcgtcgac
gctggccgtctggccggtccgatcggctacggcgagagccgtccgattgcgccgaacacc
aacccggatggttcggacaatccggaaggtcgcgccaagaaccgtcgtaccgagctgaac
gtccagaactaa
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integrated database retrieval system
