KEGG   Stenotrophomonas indicatrix: DAIF1_10550
Entry
DAIF1_10550       CDS       T07128                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K12526  bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
Organism
sinc  Stenotrophomonas indicatrix
Pathway
sinc00260  Glycine, serine and threonine metabolism
sinc00261  Monobactam biosynthesis
sinc00270  Cysteine and methionine metabolism
sinc00300  Lysine biosynthesis
sinc00470  D-Amino acid metabolism
sinc01100  Metabolic pathways
sinc01110  Biosynthesis of secondary metabolites
sinc01120  Microbial metabolism in diverse environments
sinc01230  Biosynthesis of amino acids
Module
sinc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
sinc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:sinc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DAIF1_10550 (lysA)
   00270 Cysteine and methionine metabolism
    DAIF1_10550 (lysA)
   00300 Lysine biosynthesis
    DAIF1_10550 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DAIF1_10550 (lysA)
  09110 Biosynthesis of other secondary metabolites
   00261 Monobactam biosynthesis
    DAIF1_10550 (lysA)
Enzymes [BR:sinc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.2  Phosphotransferases with a carboxy group as acceptor
    2.7.2.4  aspartate kinase
     DAIF1_10550 (lysA)
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     DAIF1_10550 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N AA_kinase Orn_DAP_Arg_deC ACT_9 Ala_racemase_N ACT
Other DBs
NCBI-ProteinID: QBR43510
LinkDB
Position
1153172..1155766
AA seq 864 aa
MSASPLVDRWIVLKFGGTSVSRRHRWDTIGKLAKKRAEETGSRVLVVVSALSGVTNELTA
IADGAPDSRDRVAALVERHQAFLDELGLGAEVLAERLAALQGLLDDPRAPSRPLDWQAEV
LGQGELLSSSLGAAYLRASGLDFGWMDARQWLDALPPQPNQSDWSQRLSVNCQWRADAEW
AQRFRAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGMF
SANPKDVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERPELPGT
SIDGNAAPVPGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFGLFKKHGLSVDLIGSAET
NVTVSLDPSENLVNTDVLAALSADLSQICKVKVIVPCAAITLVGLGMRSLLHKLSDVWAT
FGRERVHMISQSSNDLNLTFVIDEADADGLLPILHAELIDSGAMPVEETEVFGPRWREIA
GTVRPRGTPWWRGQRAHLLQLADAGTPRYVYHLPTVRARARALAAIKPIDQRYYAIKANS
HPAILQLLEAEGFGLECVSHGELKHVFQAIPELSPKRVLFTPSFCPRSEYEAAFALGVTV
TVDNVEALQRWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAAT
ELGTRVVGLHAHLGSGVETAQHWRLMCDELAGFARRIGSVHTIDIGGGLPIPYSEEDEPF
DLDAWAEGLAEVKALHPAFRLAIEPGRFLVAESGVLLTHATQVVEKDGVRRVGLDAGMNT
LMRPALYDAWHDIENLSRQGGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIAD
AGAYGYVMSNTYNQRAMPREDVIE
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgtcagcttccccccttgtcgatcgttggatcgtactgaagttcggcggcacctcggtg
tcgcgtcgccaccgctgggacacgatcgggaagctggcgaaaaaacgggccgaagagacc
ggttcgcgcgttctggtggtggtttcggcgctgtccggggtcaccaatgaactgaccgcg
attgccgatggcgcgccggacagccgcgatcgcgtggcggcgctggtcgaacgccaccag
gccttcctggacgagctggggctgggcgcggaggtgctggccgagcggctggccgcgctg
cagggcctgctggacgacccgcgtgcgcccagccgtcctctggactggcaggccgaagtg
ctcggccagggggaactgctgtcttccagcctgggcgcggcctatctgcgtgccagcggc
ctggatttcggctggatggatgcgcgccagtggctggacgcgctgccgccgcagccgaac
cagagcgactggtcgcagcgcctgtcggtgaactgccagtggcgtgccgatgcggaatgg
gcgcagcgcttccgcgcgcagcccacgcgcctgctgatcacccaggggttcatctcgcgt
cacgccgacggtggcactgccatcctcggccgcggcggctcggatacctcggcggcatac
ttcggtgcgctgctcggcgccagccgcgtggagatctggaccgatgtgccaggcatgttc
agcgccaatcccaaggacgtgccggacgcgcgcctgctgacccgcctggactattacgaa
gcgcaggaaatcgccaccaccggcgccaaggtgctgcacccgcgctcgatcaagccgtgc
cgcgatgcgggcgtgccgatggcgatcctcgataccgagcgtccggagctgccgggcacc
agcatcgacggcaatgccgcgccggtgcccggagtgaaggcaatcagccgccgcaacggc
atcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctcgccgat
gtattcggcctgttcaagaagcacggcctgtcggtggacctgatcggttcggccgagacc
aacgtcaccgtatcgctggatccgtccgagaacctggtcaacaccgatgtgctggccgcg
ctgtcggccgacctgtcgcagatctgcaaggtcaaggtgatcgtgccgtgcgcggcgatc
accctggtcggcctgggcatgcgctcgctgctgcacaagctgtcggacgtgtgggcgacc
ttcggtcgtgagcgcgtgcacatgatctcgcagtcgtccaacgacctgaacctgaccttc
gtcatcgacgaagccgatgccgatggcctgctgccgatcctgcacgccgaactgatcgac
agcggcgcgatgccggtggaagagaccgaagtgttcggcccgcgctggcgcgaaatcgcc
ggcaccgtgcgtccgcgtggtacgccgtggtggcgcggccagcgtgcgcacctgctgcag
ctggccgatgccggcaccccgcgctacgtctaccacctgccgacggtgcgggcgcgtgcc
cgcgcgctggcggcgatcaagccgatcgaccagcgttattacgcgatcaaggccaacagc
catccggccatcctgcagttgctggaggccgaaggtttcggcctggagtgcgtgtcgcac
ggtgagctgaagcatgtgttccaggccattccggaactgtcgcccaagcgcgtgctgttc
acccccagcttctgcccgcgcagcgagtacgaagcggcgttcgcgctgggcgtgaccgtc
actgtcgacaacgtcgaagccctgcaacgctggccggacctgttccgcaaccgcgaactg
tggctgcgcgtggacctgggccgtggcgaaggccaccacgccaaggtccgcaccggtggc
aaggaatccaagttcggcctgccgatcgcgcgcgtggacgagttcgtgcgcgcggccacc
gagctgggcacccgcgtggtcggcctgcatgcgcaccttggcagtggcgtggaaaccgcc
cagcactggcgcctgatgtgcgatgagctggctggcttcgcgcgccgcatcggcagcgtg
cacaccatcgacatcggtggtggcctgccgatcccgtacagtgaggaagacgagccgttc
gacctggatgcctgggccgagggcctggccgaggtcaaggcgctgcatccggcgttccgc
ctggcgatcgagccgggccgcttcctggtggccgagtcgggcgtgctgctgacccacgcc
acccaggtggtggagaaggatggcgtgcgccgcgtcggcctggatgccggcatgaacacg
ctgatgcgcccggccctgtacgacgcctggcacgacatcgagaacctcagccgccagggc
ggttacgccgaagcggcgttcgatgtggtcggcccgatctgcgaatccagcgatgtgttc
ggcaagcgccgcaagctgccggtgtcgaccgcgccggacgatgtgatgctgatcgccgac
gccggtgcctacggctatgtgatgtccaacacctacaaccagcgggcgatgccgcgcgaa
gacgtgatcgaatga

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