Stenotrophomonas indicatrix: DAIF1_10550
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Entry
DAIF1_10550 CDS
T07128
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K12526
bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:
4.1.1.20
2.7.2.4
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00260
Glycine, serine and threonine metabolism
sinc00261
Monobactam biosynthesis
sinc00270
Cysteine and methionine metabolism
sinc00300
Lysine biosynthesis
sinc00470
D-Amino acid metabolism
sinc01100
Metabolic pathways
sinc01110
Biosynthesis of secondary metabolites
sinc01120
Microbial metabolism in diverse environments
sinc01230
Biosynthesis of amino acids
Module
sinc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
sinc_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DAIF1_10550 (lysA)
00270 Cysteine and methionine metabolism
DAIF1_10550 (lysA)
00300 Lysine biosynthesis
DAIF1_10550 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DAIF1_10550 (lysA)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
DAIF1_10550 (lysA)
Enzymes [BR:
sinc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.4 aspartate kinase
DAIF1_10550 (lysA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DAIF1_10550 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
AA_kinase
Orn_DAP_Arg_deC
ACT_9
Ala_racemase_N
ACT
Motif
Other DBs
NCBI-ProteinID:
QBR43510
LinkDB
All DBs
Position
1153172..1155766
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AA seq
864 aa
AA seq
DB search
MSASPLVDRWIVLKFGGTSVSRRHRWDTIGKLAKKRAEETGSRVLVVVSALSGVTNELTA
IADGAPDSRDRVAALVERHQAFLDELGLGAEVLAERLAALQGLLDDPRAPSRPLDWQAEV
LGQGELLSSSLGAAYLRASGLDFGWMDARQWLDALPPQPNQSDWSQRLSVNCQWRADAEW
AQRFRAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGMF
SANPKDVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERPELPGT
SIDGNAAPVPGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFGLFKKHGLSVDLIGSAET
NVTVSLDPSENLVNTDVLAALSADLSQICKVKVIVPCAAITLVGLGMRSLLHKLSDVWAT
FGRERVHMISQSSNDLNLTFVIDEADADGLLPILHAELIDSGAMPVEETEVFGPRWREIA
GTVRPRGTPWWRGQRAHLLQLADAGTPRYVYHLPTVRARARALAAIKPIDQRYYAIKANS
HPAILQLLEAEGFGLECVSHGELKHVFQAIPELSPKRVLFTPSFCPRSEYEAAFALGVTV
TVDNVEALQRWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAAT
ELGTRVVGLHAHLGSGVETAQHWRLMCDELAGFARRIGSVHTIDIGGGLPIPYSEEDEPF
DLDAWAEGLAEVKALHPAFRLAIEPGRFLVAESGVLLTHATQVVEKDGVRRVGLDAGMNT
LMRPALYDAWHDIENLSRQGGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIAD
AGAYGYVMSNTYNQRAMPREDVIE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttccccccttgtcgatcgttggatcgtactgaagttcggcggcacctcggtg
tcgcgtcgccaccgctgggacacgatcgggaagctggcgaaaaaacgggccgaagagacc
ggttcgcgcgttctggtggtggtttcggcgctgtccggggtcaccaatgaactgaccgcg
attgccgatggcgcgccggacagccgcgatcgcgtggcggcgctggtcgaacgccaccag
gccttcctggacgagctggggctgggcgcggaggtgctggccgagcggctggccgcgctg
cagggcctgctggacgacccgcgtgcgcccagccgtcctctggactggcaggccgaagtg
ctcggccagggggaactgctgtcttccagcctgggcgcggcctatctgcgtgccagcggc
ctggatttcggctggatggatgcgcgccagtggctggacgcgctgccgccgcagccgaac
cagagcgactggtcgcagcgcctgtcggtgaactgccagtggcgtgccgatgcggaatgg
gcgcagcgcttccgcgcgcagcccacgcgcctgctgatcacccaggggttcatctcgcgt
cacgccgacggtggcactgccatcctcggccgcggcggctcggatacctcggcggcatac
ttcggtgcgctgctcggcgccagccgcgtggagatctggaccgatgtgccaggcatgttc
agcgccaatcccaaggacgtgccggacgcgcgcctgctgacccgcctggactattacgaa
gcgcaggaaatcgccaccaccggcgccaaggtgctgcacccgcgctcgatcaagccgtgc
cgcgatgcgggcgtgccgatggcgatcctcgataccgagcgtccggagctgccgggcacc
agcatcgacggcaatgccgcgccggtgcccggagtgaaggcaatcagccgccgcaacggc
atcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctcgccgat
gtattcggcctgttcaagaagcacggcctgtcggtggacctgatcggttcggccgagacc
aacgtcaccgtatcgctggatccgtccgagaacctggtcaacaccgatgtgctggccgcg
ctgtcggccgacctgtcgcagatctgcaaggtcaaggtgatcgtgccgtgcgcggcgatc
accctggtcggcctgggcatgcgctcgctgctgcacaagctgtcggacgtgtgggcgacc
ttcggtcgtgagcgcgtgcacatgatctcgcagtcgtccaacgacctgaacctgaccttc
gtcatcgacgaagccgatgccgatggcctgctgccgatcctgcacgccgaactgatcgac
agcggcgcgatgccggtggaagagaccgaagtgttcggcccgcgctggcgcgaaatcgcc
ggcaccgtgcgtccgcgtggtacgccgtggtggcgcggccagcgtgcgcacctgctgcag
ctggccgatgccggcaccccgcgctacgtctaccacctgccgacggtgcgggcgcgtgcc
cgcgcgctggcggcgatcaagccgatcgaccagcgttattacgcgatcaaggccaacagc
catccggccatcctgcagttgctggaggccgaaggtttcggcctggagtgcgtgtcgcac
ggtgagctgaagcatgtgttccaggccattccggaactgtcgcccaagcgcgtgctgttc
acccccagcttctgcccgcgcagcgagtacgaagcggcgttcgcgctgggcgtgaccgtc
actgtcgacaacgtcgaagccctgcaacgctggccggacctgttccgcaaccgcgaactg
tggctgcgcgtggacctgggccgtggcgaaggccaccacgccaaggtccgcaccggtggc
aaggaatccaagttcggcctgccgatcgcgcgcgtggacgagttcgtgcgcgcggccacc
gagctgggcacccgcgtggtcggcctgcatgcgcaccttggcagtggcgtggaaaccgcc
cagcactggcgcctgatgtgcgatgagctggctggcttcgcgcgccgcatcggcagcgtg
cacaccatcgacatcggtggtggcctgccgatcccgtacagtgaggaagacgagccgttc
gacctggatgcctgggccgagggcctggccgaggtcaaggcgctgcatccggcgttccgc
ctggcgatcgagccgggccgcttcctggtggccgagtcgggcgtgctgctgacccacgcc
acccaggtggtggagaaggatggcgtgcgccgcgtcggcctggatgccggcatgaacacg
ctgatgcgcccggccctgtacgacgcctggcacgacatcgagaacctcagccgccagggc
ggttacgccgaagcggcgttcgatgtggtcggcccgatctgcgaatccagcgatgtgttc
ggcaagcgccgcaagctgccggtgtcgaccgcgccggacgatgtgatgctgatcgccgac
gccggtgcctacggctatgtgatgtccaacacctacaaccagcgggcgatgccgcgcgaa
gacgtgatcgaatga
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