Stenotrophomonas indicatrix: DAIF1_11060
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Entry
DAIF1_11060 CDS
T07128
Symbol
cytR_1
Name
(GenBank) HTH-type transcriptional repressor CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sinc03000
]
DAIF1_11060 (cytR_1)
Transcription factors [BR:
sinc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DAIF1_11060 (cytR_1)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_38
HTH_Crp_2
MarR_2
HTH_24
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_5
AIRS
HTH_AsnC-type
MarR
Motif
Other DBs
NCBI-ProteinID:
QBR43561
LinkDB
All DBs
Position
1218539..1219546
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AA seq
335 aa
AA seq
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MATIYDIARHVGVSAGTVSRALSRPDKVLPATRARIEQAAAALGYVPNTVARTLKTQRSG
KILVTVPDIANPFFAQILQGAEDAAQAVGYAVLLGDTQNLPEREERYAQMLRRNEADGLI
VLGHRLPPTAREIVQQRGTAAPVVNGCEFDPALGIPSVHIDNAAAARAVMEHLYGLGHER
IAVVGGPPDNPLHTQRLEGVRAAGRARGRLRHLSVVPGDFSVESGHAAAMALLPPATAPT
AIFCFSDQMALGALAACRDLGIRVPDDVSIVGFDDLASSRYLTPPLTTIRQPMREIGERA
VNLLLAIIEQVDVPLQQTLDFSVMLRGSTAPPKGR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatctacgacatcgcaaggcacgtcggcgtctccgcaggcacggtgtcgcga
gcgctttcccggccggacaaagtgctgccggctacacgcgcgcgcatcgagcaggccgct
gctgcgctgggctacgtgcccaacacggtggccaggaccctcaagacccagcgcagcggc
aagatcctggtcaccgtgccggacattgccaacccgttcttcgcgcagatcctgcagggc
gcggaggatgcggcgcaggccgttggctacgccgtcctgctgggcgacacccagaacctg
cccgagcgcgaggagcgctacgcgcagatgctccggcgcaacgaggccgatggtctgatc
gtgctggggcatcgcctgccgccgacggcgcgcgagattgtccagcaacgaggtaccgct
gcaccggtggtcaatggctgcgagttcgatcccgcgctgggcatccccagcgtccacatc
gacaacgcggccgccgcgcgcgctgtgatggagcacctgtacggactggggcacgagcgg
atcgctgtggtgggcggaccgcccgacaatcccctgcacacgcaacggctggaaggcgtg
cgcgccgccggcagggcgcgtggccgcctgcgccacctcagcgtcgtgccgggtgacttt
tccgtggagtccggccatgcggccgcgatggcgctgctgccgcccgcaaccgcacccacc
gcgatcttctgcttcagcgaccagatggcgctgggtgcgttggcagcctgccgggatctt
ggcatccgcgtgccggatgacgtctccatcgtcggcttcgacgacctggcgtcatcgcgt
tacctcacgcctccgttgacgaccatcaggcaaccgatgcgcgagatcggtgagcgcgcg
gtcaacctgctgctcgccatcatcgaacaggtcgatgtaccgcttcagcagacgctggat
ttcagcgtgatgctgcggggttcgacggccccgcccaagggtcgctga
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