Stenotrophomonas indicatrix: DAIF1_12040
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Entry
DAIF1_12040 CDS
T07128
Name
(GenBank) autotransporter beta-domain protein
Organism
sinc
Stenotrophomonas indicatrix
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QBR43659
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All DBs
Position
1321064..1323949
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AA seq
961 aa
AA seq
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MKHSKLSIALAGLVGIATLGQMDDVMAMNYHVQGDRVVLSGGVTVADVVALPALLAKAQA
EGRPIREVVLRTSNGGALIAGEWLQGVIRTNGLNTIVSGHCISSCSIMQSGGVERYLAGD
LPLVDSVQIHAASNSGKVIYTPSPRMTEIYTGNYGGGMDAGLLHKAMYEVVQPNGLLVFR
DPARTTGASVSFDPDGSGRRLETFPGQDIYSNNIITAAGYRDPGDTLTVTGNVSGDINPG
YLRTARQLQAFVDDDFARWNDTDFATTYINYAVNIYNRSSAGPNGIGPASVQDYLNDPGT
QQLLLGQLRLDELDASTLGNSAGVIRVAKGGTWRTAETTGADFMLVENGTIALEGGALRT
PELRVLAAGMVVGHGDIASVATDSNALLDATGPSYREDGFNRLRVYGTLMPRGGDLVTHG
YVNIMPGGKVLFDVTEAGGSQAGRLRVGDFYDSGANEGALVISPGAHLELNVAQGFYAGN
YQRELVSGPIYQGGFTDAVRLGDTGYTASITDGEVFRPRHNSLLSFNINQTAEGLSLTAN
PGFDQLAQLTGNNGNDGLGRALATAGQRQDAGLKSLLGALQFADRDVIAQQAGALRGDGH
ASLRLADNALVGSIGSVVQQHQAARRSGSGDAGGLAAQAAQAASAQPGMANGSLFNQLAM
HLVEPAASAGGTSYGGEAPRSHGLWGRGFGSHGRINGEGGVAGLSHTVGGIVLGADTQLA
DDRVTLGVSVAAADMSTKGRDGSGFTGDVRALDVGGYLDATYSRGYLSASVRYTDLRHDT
RRSIDGIDGLQGPLRAKYNNDAISARLEHGFSFTTAKGVVIQPLLPVVDYARTSATRFNE
GQGAGALVGRGDSLESIRVGAGLQVFKTFEGNNGERITPRARVVWQKELGDTQARYSTGF
AAAPDLVFGASSQTVGEQVLAWNLGVTSRATDRLSVMVDYVGERRDGQLQNGVMLGLGYT
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattcgaagttgagcatcgccctggcaggcctggtgggtatcgcgaccctgggc
cagatggatgacgtcatggcaatgaattatcacgtgcagggcgatcgcgtcgtgctgagt
ggcggtgtcaccgtcgccgacgtcgtcgcgctgccggcgctgctggccaaagcgcaggcc
gaaggccgcccgatccgcgaagtcgtgctgcgcacctccaatggtggcgcgctgatcgcg
ggtgagtggctgcagggcgtgatccgcaccaacggcctgaacaccatcgtgtccggccac
tgcatctcgtcctgctcgatcatgcagtccggtggcgtcgaacgttacctggccggcgac
ctgccgctggtcgactcggtgcagatccacgctgccagcaacagtggcaaggtgatctac
acgccgtcgccgcggatgaccgagatctacaccggcaactacggcggcggcatggatgcc
ggcctgctgcacaaggccatgtacgaggtggtgcagcccaacggcctgctggtgttccgc
gacccggcccggaccaccggcgcttcggtcagcttcgatcccgatggcagcggccgcagg
ctggagaccttccccggccaggacatctacagcaacaacatcatcaccgccgccggttac
cgcgatccgggcgataccctgacggtcaccggcaatgtcagcggcgacatcaatccaggc
tacctgcgcactgcgcgccagctgcaggcgttcgtcgatgacgacttcgcgcgctggaac
gataccgacttcgccaccacgtacatcaactatgcggtgaacatctacaaccgctccagc
gccggcccgaacggcatcggcccggcttcggtgcaggattacctcaacgatccgggtaca
cagcagctccttctgggccagctgcgcctggatgaactggacgcctccacgctgggcaat
tcggctggcgtgatccgcgtcgccaagggcggcacctggcgcaccgccgaaaccaccggc
gccgatttcatgctggtggagaacggcaccatcgccctggaaggcggcgcattgcgcacc
ccggagctgcgcgtgctggcggccggcatggtggtcggccacggcgacatcgcctcggtt
gccaccgactcgaacgcactgctcgatgccaccggcccgtcgtaccgcgaggacggcttc
aaccgcctgcgcgtgtacggcaccctgatgccgcgtggtggtgatctggttacccatggc
tacgtcaacatcatgccgggcggcaaggtgctgttcgacgtgactgaagccggcggctcc
caggccgggcgcctgcgtgtgggcgacttctacgacagcggcgccaacgagggtgcgctg
gtcatctcgccgggcgcccaccttgaactgaacgtggcgcagggcttctacgccggcaac
taccagcgtgagctggtgagcggcccgatctaccagggcggtttcaccgatgcggtgcgc
ctgggtgacaccggctatacggccagcatcaccgacggcgaggtgttccggccgcgccac
aattcgctgctgagcttcaacatcaaccagaccgccgagggcctgtcgctgaccgccaac
cccggcttcgaccagctcgcgcagctcaccggcaacaatggcaacgatggactcggtcgc
gcgctggccactgccggccagcgccaggatgccgggttgaagtcgctgctgggggcgctg
cagttcgctgaccgcgatgtgatcgcccagcaggccggtgcactgcgtggtgatggccat
gccagcctgcgcctggccgacaacgcgctggttggcagcatcggcagcgtggtgcagcag
caccaggccgcacggcgcagcggcagcggtgatgccggtggcttggccgcacaggccgcg
caggcggcgtcagctcagccgggcatggccaatggcagtctgttcaaccagttggcgatg
catctggtggagccggcggcgagcgctggcggcacgagttacggcggcgaagcgccgcgc
agccatggcctctggggccggggctttggcagccatggccgcatcaatggcgagggcggc
gtggccggcctgagccataccgtcggcggcatcgtgctcggtgccgatacgcagctggcc
gatgaccgggtgacgctgggcgtcagcgttgccgccgcggacatgtcgaccaagggccgc
gatggttccgggttcaccggtgatgtgcgcgcgctggatgtgggcggctacctggatgcc
acctactcgcgtggctacctctcggcctcggtgcgctataccgacctgcgccacgacacc
cgccgcagcatcgacggcatcgacggcctgcagggcccgctgcgtgccaagtacaacaac
gatgcgatctcggcccggctggagcacggcttctcgttcaccaccgccaagggcgtggtg
atccaaccgctgctgccggtggtcgattacgcgcgcacctcggccacccgtttcaatgaa
gggcagggagccggcgcactggtggggcgtggtgacagcctggaaagcatccgcgtcggt
gcgggcctgcaggtgttcaagaccttcgaaggcaacaacggcgagcgcatcaccccgcgc
gcgcgcgtggtctggcagaaggaactgggcgacacccaggcccgttatagcaccggcttc
gccgctgcgccggacctggtgttcggtgccagcagccagaccgtgggcgagcaggtgctg
gcctggaacctgggtgtgaccagccgcgctaccgatcgcctgtcggtgatggtcgactac
gtgggcgagcgccgcgacggccagctgcagaacggcgtgatgctgggcctgggctatacg
ttctaa
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