Stenotrophomonas indicatrix: DAIF1_12180
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Entry
DAIF1_12180 CDS
T07128
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_12180 (radA)
DNA repair and recombination proteins [BR:
sinc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DAIF1_12180 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_16
Lon_C
SLFN-g3_helicase
DUF7125
AAA_24
PAXNEB
AAA_30
AAA
RecA
nSTAND3
Rad51
MCM
AAA_33
DAP3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QBR43672
LinkDB
All DBs
Position
1338179..1339555
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AA seq
458 aa
AA seq
DB search
MAKARTAYVCNECGAEYSKWQGQCTECNAWNSLSEIVLESAAAAKAPASRRAGWAGKIDP
PKITALKDVAQTEHNRVSTGIGEFDRVLGGGLVEGAVVLVGGDPGIGKSTLLLQAVAKMA
AVLPVLYVTGEESLAQVAGRAHRLELPLEGVNALAETGVESILQHATKSGPRLIVADSVQ
TLWTETLTAAPGSVSQVRESAARLVRFAKETGTAVFLVGHVTKEGGIAGPRVLEHMVDAV
LYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGDKGLKEVSNPSAIFLSGASTHQPGSCV
MVTREGTRPLLVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGVLVGDQDVFV
NVVGGIRVQETAADLPVLLAVLSSLQDRPLAEKTIAFGEVGLSGEIRPVPNGEDRLREAA
THGFKRAIVPKANAPKGGSVKGMEVIAVERLSEAIDAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcccgcaccgcgtatgtctgcaatgaatgcggcgccgaatacagcaagtgg
caaggccagtgcaccgagtgcaatgcctggaactcgctgtcggaaatcgtccttgagagc
gctgcggcggccaaggcgcccgcctcgcgccgtgccggctgggcgggcaagatcgacccg
ccgaagatcaccgcactgaaggacgtggcgcagaccgaacacaaccgggtcagcaccggc
atcggtgaattcgaccgcgtgctcggcggcggcctggtcgagggcgcggtggtgctggtc
ggtggtgatccgggcatcggcaaatccaccctgctgctgcaggcggtggcgaagatggct
gcggtcctgccggtgctctacgtcaccggtgaagaatcactggcccaggtcgccggccgc
gcgcatcggctggagctgccgctggagggcgtcaacgcgctggccgagaccggtgtcgaa
tccatcctgcagcacgccaccaagagtgggccgcggctgatcgtggccgattcggtacag
accctctggaccgagacgctgaccgccgcgcccggttcggtcagccaggtgcgcgagagt
gccgcacggctggtgcgtttcgccaaggaaaccggaaccgccgtgttcctggtcggccat
gtgaccaaggaaggcggcatcgccggcccgcgcgtgctggagcacatggtcgatgccgtg
ctgtatttcgagggcgagagtggcagccgcttccgcctgctgcgcgcgttcaagaaccgc
tttggtgcggtcaacgagctgggcgtgttcgcgatgggcgacaagggcctgaaggaggtc
tccaatccgtcggcgatcttcctttccggtgccagcacgcaccagccgggcagctgcgtg
atggttacccgcgagggcacccggccgctgctggtggaagtgcaggcgctggtcgacgcc
tcgccgctgtccaatccgcgccgcgtggcggtggggctggagcagaaccgcctggccatg
ctgctggcggtgctgcatcggcatggcggcgtgctggttggcgaccaggacgtgttcgtc
aacgtggtcggcggcatccgcgtgcaggagaccgccgccgacctgccggtgctgctggcg
gtgctgtcctcgctgcaggaccgtccgctggccgagaagaccatcgcgttcggcgaagtc
ggcctgtccggtgagatccggccggtgcccaacggcgaggatcgcctgcgcgaggcggcg
acccacggtttcaagcgcgccatcgtgcccaaggccaatgcccccaagggcggctcggtg
aagggcatggaagtgatcgcggtcgaacgcctgtccgaggccatcgacgcggcgtga
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