Stenotrophomonas indicatrix: DAIF1_12620
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Entry
DAIF1_12620 CDS
T07128
Symbol
rocD2
Name
(GenBank) ornithine aminotransferase 2
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00250
Alanine, aspartate and glutamate metabolism
sinc00280
Valine, leucine and isoleucine degradation
sinc00310
Lysine degradation
sinc00410
beta-Alanine metabolism
sinc00640
Propanoate metabolism
sinc00650
Butanoate metabolism
sinc01100
Metabolic pathways
sinc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DAIF1_12620 (rocD2)
00650 Butanoate metabolism
DAIF1_12620 (rocD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DAIF1_12620 (rocD2)
00280 Valine, leucine and isoleucine degradation
DAIF1_12620 (rocD2)
00310 Lysine degradation
DAIF1_12620 (rocD2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DAIF1_12620 (rocD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sinc01007
]
DAIF1_12620 (rocD2)
Enzymes [BR:
sinc01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
DAIF1_12620 (rocD2)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
DAIF1_12620 (rocD2)
2.6.1.48 5-aminovalerate transaminase
DAIF1_12620 (rocD2)
Amino acid related enzymes [BR:
sinc01007
]
Aminotransferase (transaminase)
Class III
DAIF1_12620 (rocD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Clathrin
Motif
Other DBs
NCBI-ProteinID:
QBR43716
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All DBs
Position
complement(1402950..1404350)
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AA seq
466 aa
AA seq
DB search
MNIFDKNADAAITDAQLLADEARYSSFGDTVHYVDPPKIFQRCEGSYMFDAAGTPYLDLQ
MWYSACNFGYANQRLNNALKDQIDTLPQVASQYLHPTRVQLAKTIAVDMHEKFGLDGRVH
FNVGGAQAVEDSLKIVRNARNGKSLMFAFEGGYHGRTLGASSITSSYRYRRRYGHFGERA
MFIPFPYPFRRPKGMTPDEYSDHCVHQFERLFESEYNGVWDPKVGQAEYAAFYVEPIQGT
GGYVIPPRNFFKGLKRVLDKYGILMVVDEIQMGFWRTGKLWAIEHFDVTPDVLVFGKALT
NGLNPLSGLWAREELINPTVFPPGSTHSTFNSNPLGTRLGLEVLKLGKEMDYERTVPEKG
AYFLDGLRGLQKRHPEIGDVDGLGLALRAEICAADGFTPNRELLDRMVDIGLAGDLLHDG
KRMGLVLDVGGWYKNVITFAPSLNISYEEIDLAITLLDQLLTKAKG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttgacaagaacgccgatgccgccatcaccgatgcacagctgctggcagac
gaagcccgctacagctccttcggcgacaccgtgcactacgttgatccgccgaagatcttc
cagcgctgcgaaggcagctacatgttcgatgccgccggcaccccgtacctcgatctgcag
atgtggtactcggcgtgcaacttcggttacgccaaccagcgcctgaacaatgcgctgaag
gaccagatcgacaccctgccgcaggtcgccagccagtatctgcaccccacgcgcgtgcag
ctggccaagaccatcgcggtggacatgcacgagaagttcggcctcgatggccgggtgcac
ttcaacgtcggtggtgcgcaggcggtggaggattcgctgaagatcgtccgcaacgcgcgc
aacggcaagagcctgatgttcgccttcgaaggcggctaccacggccgcaccctcggcgcc
tcgtcgatcacctccagctaccgctaccgccgccgctacggccatttcggcgaacgcgcg
atgttcatcccgttcccgtatccgttccgtcgcccgaagggcatgaccccggacgagtac
tccgaccactgcgtgcaccagttcgagcgcctgttcgaaagcgagtacaacggcgtgtgg
gaccccaaggtcggccaggccgagtacgccgcgttctacgtcgagccgatccagggcacc
ggcggctacgtcattccgccgcgcaacttcttcaagggcctcaagcgcgtgctggacaag
tacggcatcctgatggtcgtcgacgagatccagatgggcttctggcgcaccggcaagctg
tgggccatcgaacacttcgatgtcaccccggacgtgctggtgttcggcaaggcgctgacc
aatggcctcaacccgttgtcgggcctgtgggcgcgcgaagagctgatcaacccgaccgtg
ttcccgccgggctccacccactccaccttcaactccaatccgctgggcacgcgcctgggc
ctggaagtgctgaagctgggcaaggagatggactacgagcgcaccgtgccggagaagggg
gcctacttcctcgacggcctgcgcggcctgcagaagcgccatccggaaatcggcgatgtc
gatggcctcggcctggcactgcgtgcggaaatctgcgccgccgatggcttcaccccgaac
cgtgaactgctggatcgcatggtcgacatcggcctggccggcgacctgctgcacgacggc
aagcgcatgggcctcgtgctcgatgtgggtggctggtacaagaacgtgatcaccttcgcg
ccctcgttgaacatcagctacgaagagatcgacctggcgatcaccctgctggaccagctg
ctgaccaaggccaagggctga
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