Stenotrophomonas indicatrix: DAIF1_12950
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Entry
DAIF1_12950 CDS
T07128
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinc02000
]
DAIF1_12950
Transporters [BR:
sinc02000
]
Other transporters
Pores ion channels [TC:
1
]
DAIF1_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QBR43749
LinkDB
All DBs
Position
complement(1441078..1443276)
Genome browser
AA seq
732 aa
AA seq
DB search
MPSRHPRFKPHSLALALAALLPSVAFAASGDDSHRDRHLTELSSVQVTASPLQGDAESLA
RPVEVLAGERLDEQKAGTLGDTVAKLPGVQSTFFGPGVGRPIIRGQEGPRVAVLSNGMGN
MDASTVSADHATSIEPFLADQIEVLKGPATLLFGSGAIGGAVNVVDGRIARELPDRPLSG
RAELRGNSVNDERSGMFRLDGVSGNVVLHVDGLVRNGDDFRIPGYAVIDGLEDHHDDHDH
TGEEGEEPRRGRLDNSSIRTRAGGVGATWLGEGGYFGASASTYRTNYGIPNGAHVHADGD
GHDHDHDHDHGEEEEGEEHDVRIDMVQNRFETKAGIYNPVSFLKNVNARVAYTDYEHVEL
EAGTPSTRFTNRGIEGRLEAVQQQIGGWDGAFGLQFGNSDFGAKGEEAFVPDTGTKNIGL
FVLQEKQFGPFKLELGGRHDQVKLDPTGDYRRRKFDATNLSAAGIWKLNDAVDLRIGVDS
SERAPTNEELYAAGAHIATRSLEIGDANLKTERGQRIELGIHTHSERLDFSAAIYQTRFK
DFIYLADTGITESLPVRTWTQQDAVFKGAEAEALVHLFEGGAGDWDLRVFGDYVQAKLDG
NGSRTLDIAVPHGDHNHNYSVELANTGYLPRIAPARVGADLRWAKDGWRASVGAVRYSRQ
KDVAQNEEPSNGYTLVDAHLAYRWDRSDSNSYELFLDGSNLTNREVRPHTSLLKDYSPLP
GRGVAFGIRAFF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccctcccgtcaccctcgtttcaagccgcattccctggccctggcgcttgctgcgctg
ctgccctccgtcgcctttgcggcctccggcgatgattcgcatcgtgaccgccacctgacc
gagttgtcctcggtgcaggtcacggcatcgccgctgcagggtgatgccgaatcgctggcg
cgcccggttgaagtgctggccggtgagcgcctggacgagcagaaggccggcaccctcggt
gacaccgtcgccaagctgcccggcgtgcagagcaccttcttcggccccggcgtcggccgc
ccgatcatccgtggccaggaaggtccgcgcgtggccgtgctgtccaacggcatgggcaac
atggacgcctccaccgtcagcgccgaccatgccaccagcatcgagccgttcctggccgac
cagatcgaagtactgaaaggcccggctaccctgctgttcggcagcggcgcgatcggcggt
gcggtgaacgtggtcgatgggcgcattgcgcgcgaactgccggatcgaccgctcagcggc
cgtgccgagctgcgtggcaattcggtcaacgacgaacgcagcggcatgttccgcctggac
ggcgtgagcggcaatgtcgtgctgcacgtggatggcctggtgcgcaatggcgatgatttc
cgcattcccggctacgcggtgatcgacggcctggaagaccaccacgatgaccacgaccac
acgggcgaggaaggcgaagagccgcgtcgcggccgcctggacaacagttccatccgcacc
cgcgccggtggcgtcggcgccacctggctgggcgaaggcggctacttcggcgcctcggcc
agcacctaccgcaccaactacggcatccccaacggcgcccacgtgcatgccgacggcgat
ggccacgaccatgatcacgaccacgaccatggcgaggaggaggaaggtgaagagcacgac
gtgcgcatcgacatggtgcagaaccgtttcgagaccaaggccggcatctacaacccggta
tcgttcctgaagaacgtcaacgcgcgcgtggcctacaccgactacgaacacgtggagctg
gaagccggcacgccgtccacccgcttcaccaaccgcggcatcgaaggccgcctggaagcg
gtgcagcagcagatcggcggctgggacggcgccttcggcctgcagttcggcaacagcgat
ttcggcgccaagggcgaagaagcgttcgtgcccgataccggaaccaagaacatcggcctg
ttcgttctgcaggaaaagcagttcggcccgttcaagctggaactgggcggtcgccacgac
caggtcaagctggacccgaccggcgactaccgccgccgcaagttcgacgccaccaacctg
tcggccgccggtatctggaagctcaacgatgcggtcgacctgcgcatcggcgtggacagc
tccgagcgtgcaccgaccaatgaggagctgtacgccgcgggtgcgcacatcgccacccgt
tcgctggaaatcggtgatgccaacctgaagaccgagcgcggccaacgcatcgaactgggc
atccacacccacagcgagcgcctggacttctccgccgcgatctaccagaccaggttcaag
gacttcatctacctggccgacaccggcatcaccgagagcctgccggtgcgcacctggacc
cagcaggacgcggtgttcaagggcgccgaagccgaagcgctggtgcacctgttcgaaggc
ggcgccggcgattgggacctgcgcgtgttcggcgactacgtgcaggccaagctggacggc
aacggcagccgtaccctggacatcgccgtgccgcacggcgaccacaaccacaactacagc
gtggaactggccaacaccggttacctgccgcgcatcgccccggcccgtgtcggcgccgac
ctgcgctgggcgaaggatggctggcgtgcctccgtgggcgcggtgcgttacagccggcag
aaggacgttgcgcagaacgaggagccgagcaacggctacaccctggtcgatgcgcacctg
gcctaccgctgggaccgcagcgacagcaacagctacgagttgttcctggatggcagcaac
ctgaccaaccgcgaagtgcgtccgcatacctcgctgctgaaggattactcgccgctgccg
ggtcgtggtgtcgccttcgggatccgcgcgttcttctga
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integrated database retrieval system
