Stenotrophomonas indicatrix: DAIF1_14430
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Entry
DAIF1_14430 CDS
T07128
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinc03016
]
DAIF1_14430 (miaB)
Enzymes [BR:
sinc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DAIF1_14430 (miaB)
Transfer RNA biogenesis [BR:
sinc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DAIF1_14430 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QBR43894
LinkDB
All DBs
Position
complement(1610181..1611599)
Genome browser
AA seq
472 aa
AA seq
DB search
MTGTPDVFPPAAQGGTPLVALPSGPRKPDQVKGKLYIKTHGCQMNEYDSAKMADVLAASD
GLELTDRPEDADVILVNTCSIREKAQEKVFSQLGIWKSLKNQGREVIIGVGGCVASQEGE
AIIKRAPFVDLVFGPQTLHRLPELIRARREQQRPQVDISFPEIEKFDRMPEPRADGASAF
VSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPY
GDGELADLGLLIRTIAEIDGIGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGS
DRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGF
DHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAQISEKMVGSVQTVLVE
GPSRKNPNELTGKTENMRSVNFPAHPRLIGQFVDVVITEAMTNSLRGRVVTE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgccagacgtctttccgcccgccgcccagggcggcactccgctcgttgcc
ctgccctctggtccgcgcaagcccgaccaggtgaagggcaagctgtacatcaagacccac
ggttgccagatgaacgaatacgactcggccaagatggccgacgtgctcgccgccagcgat
ggcctggaactgaccgatcgcccggaagacgccgacgtcatcctggtcaatacctgctcg
atccgcgaaaaggcgcaggagaaggtgttcagccagctgggcatctggaagagcctgaag
aaccagggccgtgaggtcatcatcggcgtaggcggttgcgtggcgtcgcaggaaggcgag
gcgatcatcaagcgtgcgccgttcgtcgacctggtgttcggcccgcagacactgcatcgc
ctgccggaactgatccgcgcccgtcgcgagcagcagcgcccgcaggtggacatcagcttc
ccggaaatcgagaagttcgatcgcatgcccgaaccgcgtgccgatggcgcatcggcgttc
gtgtcgatcatggaaggctgctccaagtactgttcgttctgcgtggtgccctacacgcgt
ggtaccgaagtcagccgcccgttcgaagacgtggtggtggaagtggcacagcttgcggca
cagggcgtgcgcgagatcaacctgctcggccagaacgtcaacgcctaccgtggcccctat
ggtgacggcgagctcgccgacctcggcctgctgatccgcaccatcgccgagatcgacggc
atcggtcgcatccgcttcaccacctcgcatccactggagttcagcgattcgttgatcgac
gcgttccgcgacgtgccgcagctggccaacttcctgcacctgcctgtgcaggcaggcagc
gaccgcgtgctgtcagcgatgaagcgcggttacaccgcactggaattcaagtcgaagatc
cgcaagctgcgtgcggtgcgccccgatatctcgatcagttcggacttcatcgtcggtttt
cccggcgagaccgatgctgatttcgagaagaccatgaagctgatcgaggatatcggcttc
gaccacagcttctccttcatctattcgcgtcgcccgggcacgccggctgcagacctggaa
gacacgatcagcgacgcggaaaagcatgcgcgcctgtcgcggctgcaggaacggatcaac
gcgcatgccgcgcagatctccgaaaagatggtcggcagcgtacagaccgtgctggtggaa
ggcccctcgcgcaagaacccgaacgaactgaccggcaagaccgagaacatgcgttcggtg
aacttcccggcgcacccgcgcctgatcggccagttcgtggacgtggtgatcaccgaagcg
atgaccaactcgctgcgcgggcgcgtggtgacggaataa
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