Stenotrophomonas indicatrix: DAIF1_14870
Help
Entry
DAIF1_14870 CDS
T07128
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DAIF1_14870 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinc02000
]
DAIF1_14870 (msbA)
Enzymes [BR:
sinc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DAIF1_14870 (msbA)
Transporters [BR:
sinc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DAIF1_14870 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_30
AAA_16
AAA_22
DEAD
DUF3584
nSTAND1
ABC_ATPase
AAA_21
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QBR43935
LinkDB
All DBs
Position
1649397..1651145
Genome browser
AA seq
582 aa
AA seq
DB search
MSSHHAPVWPIYKRLLGYTRTYWVFMIGAVIAMVVEALAGYHFTKLMEPLVNRGFVNPEP
RMAVILPLTILGLFLMRSVATWVSDYTLAKTGRSVVRDLREQVLQKYLHLPSSHFDAEAT
PVMVSRLNFDTEQVTQASADALKTVVADTLTIIAMLAVMLQMSVKVTLAMLVVVPLIGVI
VSYVGKRYRRISRGIQDGMGTMAQTAEQSLAAQQEVKVHGTQQHEISRYSRLANRMLALN
MKVEVTRAAASSVVQFLAALALAVIVWVSTREALAGKLNAGQFMGLMTSMMAIIPSLRRL
TSVQTSISRGVAAAERLFGIIDMPVERDEGKHAVQRVRGELAFEHVMLRYREDSGIALDD
ISFVARPGTVTAIVGRSGSGKTSLIRLVPRFYEPNGGRILLDGVALDEYPLADLRRQVAI
VGQKVMLFDDTIAANIAYGMDATDEQIRAAAEAANAWEFIARMPQQLQTPVGENGALLSG
GQRQRLAIARAILRDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIE
HADQVLVMDHGRIVERGTHQELLSMGGLYQHLHNMQFRERQD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccatcacgcgccagtgtggccgatctacaaacgactgctgggctatacccgc
acctactgggtgttcatgatcggcgcggtcatcgcgatggtggtcgaagccctggccggc
tatcacttcaccaagctgatggagccgctggtcaaccgcgggttcgtcaaccccgagccg
cgcatggcggtgatcctgccgctgaccattctcggcctgttcctgatgcgcagcgtggcc
acctgggtcagcgactacacgctggccaagaccggccgcagcgtggtccgcgacctgcgt
gaacaggtgctgcagaagtacctgcacctgccgtcctcgcatttcgatgccgaggcgacg
ccggtgatggtcagccgcctgaacttcgacaccgaacaggtcacccaggccagtgccgac
gcgctgaagaccgtggtggccgataccctgaccatcatcgccatgctggcggtgatgctg
cagatgagcgtcaaggtgaccctggcgatgctggtggtggtgccgctgatcggcgtgatc
gtgtcctacgtgggcaagcgctaccggcgcatcagccgcggcatccaggacggcatgggc
accatggcgcagaccgccgagcagtcgctggccgcgcagcaggaagtgaaggtacacggc
acccagcagcacgagatctcgcgctactcgcgcttggccaaccgcatgctggcgctgaac
atgaaggtggaagtgacccgcgcggcggcctccagcgtggtccagttcctggcggcgctg
gcgctggcagtcatcgtctgggtgtccacccgcgaggcactggccggcaagctcaatgcg
ggccagttcatgggcctgatgacgtcgatgatggccatcattccgtcgctgcggcggctg
accagcgtgcagacttcgatctcgcgcggtgtggctgcggccgagcgcctgttcggcatc
atcgacatgccggtcgagcgcgacgagggcaagcacgcggtgcagcgcgtacgcggcgaa
ctggccttcgagcacgtcatgctgcgttaccgtgaagacagtggcatcgccctggacgac
atcagcttcgttgccaggccgggcacggtcaccgccatcgtcggtcgttccggcagcggc
aagaccagcctgatccggctggtgccgcgcttctacgaacccaacggtggccgcatcctg
ctcgacggcgttgccctggatgagtatccgttggccgatctgcgccggcaggtggccatc
gtcggccagaaggtcatgctgttcgacgacaccatcgcggccaacatcgcctacggcatg
gatgccaccgacgagcagatccgtgcagctgccgaggcggccaatgcctgggagttcatc
gcacgcatgccgcagcagttgcagacgccggtaggcgagaatggcgcgctgttgtccggc
ggccagcgccagcgcctggcgatcgcccgcgcgatcctgcgcgacgcaccgatcctgatc
ctggacgaggccaccgcggcgctggacaacgaatccgagcgcctggtgcaggatgcgctg
cagcgcttgatgcccgagcgcaccacgctggtgatcgcgcatcgcctgtcgaccatcgag
catgccgaccaggtgctggtgatggaccatggccgcatcgttgaacgcggcacccaccag
gagctgctgtcgatgggcggcctgtaccagcacctgcacaacatgcagttccgcgaaagg
caggactga
DBGET
integrated database retrieval system
