KEGG   Stenotrophomonas indicatrix: DAIF1_15390
Entry
DAIF1_15390       CDS       T07128                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase 4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sinc  Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:sinc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sinc03032]
    DAIF1_15390 (parE)
   03036 Chromosome and associated proteins [BR:sinc03036]
    DAIF1_15390 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sinc02048]
    DAIF1_15390 (parE)
Enzymes [BR:sinc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DAIF1_15390 (parE)
DNA replication proteins [BR:sinc03032]
 Prokaryotic type
  DNA Topoisomerases
   DAIF1_15390 (parE)
Chromosome and associated proteins [BR:sinc03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    DAIF1_15390 (parE)
Prokaryotic defense system [BR:sinc02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    DAIF1_15390 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: QBR43981
LinkDB
Position
complement(1692719..1694608)
AA seq 629 aa
MNARYNAADIEVLSGLDPVKRRPGMYTDTARPNHLAQEVIDNSVDEALAGHAHSIEITLF
KDGSVEVSDDGRGMPVDIHPEEKIPGVELILTRLHAGGKFNNNNYTFSGGLHGVGVSVVN
ALSTLVEIHIKREGAEHRITFRNGDRASPLEVVGTVGKKNTGTRLRFWPDPKYFDTPKFA
VRALKHLLRAKAVLCPGLTVKLTDEATGEVDTWYYEDGLRDYLKLELGDRESLPADLFVG
NLKKDTEIVDWAVAWLPEGELVQESYVNLIPTAQHGTHANGLRTGLTEALREFCDFRNLL
PRGVKLAPEDVWDRVSFVLSLKMTDPQFSGQTKERLSSRQAAGFVEGAAHDAFSLLLNQN
VELGEKIAQIAIERASARLKTEKLVVRKKVTQGPALPGKLADCISQDLSRTELFLVEGDS
AGGSAKQARDKDFQAILPLRGKILNTWEVSSNSVLASEEVHNLAVAIGCDPGKEDISGLR
YGKVIILADADSDGLHIATLLTALFLKHFPALVDAGHVFVAMPPLFRIDVGKQVFYALDE
EEKRSMLDKIEREKIKGAINVTRFKGLGEMNPPQLRESTIHPDTRRLVQLTIDDGEQTHS
LMDMLLAKKRASDRKGWLESKGDLASLEV
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgaacgcccgctataacgccgccgatattgaagtcctgtccggccttgacccggtcaag
cgccgccccggcatgtataccgacaccgcgcgcccgaaccatctggcgcaggaagtgatc
gacaactcggtggacgaggccctcgccggccatgcccactcgatcgagatcaccctgttc
aaggacggcagcgtggaggtcagcgatgacggccgcggcatgccggtggacatccatccg
gaagagaagatcccgggcgtcgagctgatcctgacccgcctgcatgccggcggcaagttc
aacaacaacaactacaccttctccggcggcctgcatggcgtcggcgtcagcgtggtcaat
gcgctgtcgaccctggtggaaatccacatcaagcgcgagggtgccgagcaccgcatcacc
ttccgcaacggcgaccgcgcctcgccgctggaagtggtcggcaccgtaggcaagaagaac
accggtacccgcctgcgtttctggccggacccgaagtacttcgatacgcccaagttcgcc
gtgcgcgcgctcaagcacctgctgcgcgccaaggccgtgctgtgcccgggcctgaccgtc
aagctgaccgacgaagccaccggcgaggtcgacacctggtactacgaggatggcctgcgc
gattacctgaagctggagctgggcgatcgcgagtcgctgccggctgatctgttcgtgggc
aacctgaagaaagacaccgagatcgtggactgggccgtggcctggctgccggaaggcgag
ctggtgcaggaaagctacgtcaacctgattcccaccgcacaacatggcacccacgccaac
ggcctgcgcaccggcctgaccgaagcgctgcgcgagttctgcgacttccgcaacctgctg
ccgcgcggcgtcaagctggccccggaagacgtgtgggaccgcgtgtcgttcgtgctgtca
ctgaagatgaccgacccgcagttcagcggccagaccaaggaacgcctgtcctcgcgccag
gccgccggttttgtcgaaggcgccgcgcacgatgcgttcagcctgctgctgaaccagaac
gtagagctgggcgagaagatcgcgcagatcgccatcgagcgcgccagtgcgcgcctgaag
accgagaagctggtcgtccgcaagaaggtcacccagggccctgccctgcccggcaagctg
gccgactgcatcagccaggacctgtcgcgcaccgaactgttcctggtcgagggcgactcg
gcaggcggcagcgccaagcaggcccgcgacaaggatttccaggcgatcctgccgctgcgc
ggcaagatcctcaacacctgggaagtgtcctccaacagcgtgctggcctcggaggaagtg
cacaacctggcagtggccatcggctgtgacccgggcaaggaagacatcagcggcctgcgc
tacggcaaggtgatcatcctggccgacgccgactccgacggcctgcatatcgcaacgctg
ctgaccgcactgttcctgaagcacttcccggcgctggtcgatgccggccacgtgttcgtg
gcgatgccgccgctgttccgcatcgacgtgggcaagcaggtgttctacgccctggatgag
gaagaaaagcgctcgatgctggacaagatcgaacgcgagaagatcaagggcgccatcaac
gtgacccgcttcaagggcctgggcgagatgaatccgccgcagctgcgtgaatccaccatc
catccggacacccgtcgcctggtgcagttgaccattgacgatggcgagcagacccattca
ctgatggacatgctgctggccaagaagcgcgcgtcggaccgcaagggctggctggagagc
aagggcgatctggcttcgctggaagtctga

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