Stenotrophomonas indicatrix: DAIF1_15570
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Entry
DAIF1_15570 CDS
T07128
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinc03009
]
DAIF1_15570 (rlmE)
Enzymes [BR:
sinc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
DAIF1_15570 (rlmE)
Ribosome biogenesis [BR:
sinc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DAIF1_15570 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
SUV3_C
Methyltransf_23
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QBR43999
LinkDB
All DBs
Position
1707472..1708104
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AA seq
210 aa
AA seq
DB search
MATRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELLERDRLLKPHMVVVDLGAAP
GGWSQQVRRQIGDTGRVLALDILDMPPLAGVEFLHGDFREETVLSQFEAMLGDQPVDLVL
SDMAPNKSGVDAVDQPRMMHLAELAMDFADNHLKTGGAFLIKLFQGEGFDDYVRDMRRRY
DKVSIRKPEASRKRSPEVYALGQGKRAHMK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgcagcaaaagcagccagcgctggctcaaggaacacttctccgatcccttc
gtgaagaaggcccaggccgaaggcatgcgctcccgtgcggcctacaagcttgaagaactg
ctcgaacgtgaccgcctgctgaagccgcacatggtggtggtcgacctcggcgcggccccg
ggtggctggtctcagcaggtgcggagacagatcggcgataccggccgcgtgctggccctg
gacatcctggacatgccgccgctggccggcgtggagttccttcacggtgacttcagggaa
gaaaccgtcctatcgcagtttgaagccatgctcggggatcagccggtagaccttgtgctg
tcggacatggcccccaataagagtggtgtggacgcggtcgaccagccgcggatgatgcac
ctggcggagctggccatggattttgccgacaaccacctcaagactggtggggcgttcctg
atcaagctgttccagggcgaaggctttgacgactacgtgcgcgacatgcgccgccggtac
gacaaggtctccatccgcaagccggaagcctcgcgcaagcgctctcccgaggtgtatgcc
ttgggtcagggaaaacgcgcccacatgaagtaa
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