Stenotrophomonas indicatrix: DAIF1_16500
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Entry
DAIF1_16500 CDS
T07128
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_16500 (phrA)
Enzymes [BR:
sinc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DAIF1_16500 (phrA)
DNA repair and recombination proteins [BR:
sinc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DAIF1_16500 (phrA)
Prokaryotic type
DAIF1_16500 (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBR44087
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All DBs
Position
1809461..1810876
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALEAGHAVVPVYIHAPHEEGEWAPGAASNAWRHRSLAA
LDADLRARGSSLVLRAGDSLPTLLELVQQTGAEAVYWNRKYEPATQPRDAAIKRTLREQG
IDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWRLPALRAAPETLPAHTVDSLA
LDTLQLAPTLHWDTGFWEHWQPGETGALEALSVFEDGALRGYREQRDLPDRVGTSRLSPH
LHFGEIAPWRIAHALEGLRSAGTDADIDGYLRQLGWRDFAHHLLHHFPKTPTDNLNPRFD
RFPWASPSAAQLHDWQRGNTGVPIVDAGLRELWHTGYMHNRVRMIVASYLCKHLRAHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQARYISRWVPE
LAALPVKARFAPWQHPHLLAERAPGYPRTPLVDLAAGRDAALAAYRQSAAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtatggttccgtcgggacctgcggttgcaggacaatccggcgctg
caggcggcgctggaagcgggccacgctgtggtgccggtgtacatccacgcgccgcacgaa
gagggcgagtgggcgccgggcgcggcctccaatgcatggcgccatcgttcgctggcagcg
ctggacgccgacctgcgtgcacggggttcatcgctggtgctgcgtgccggtgacagcctg
ccgaccctgctggagctggtgcagcagaccggcgctgaagcggtgtactggaaccgcaag
tacgaaccggcgacgcaaccgcgcgatgccgccatcaaacgcacgctgcgcgagcagggc
atcgatgcgcagagctgcaacggcagcctgctgttcgagccctgggacatcgccacccag
caggggcagccctacaaggtattcactccgtactggcgcaacgtactcagccactggcgt
ttgcccgccttgcgggccgcaccggagacgctgccggcgcatacggttgacagcctcgcg
ctggatacgctgcagctggcgcccacgcttcactgggataccgggttctgggaacactgg
cagccgggcgagaccggtgcgctcgaggcgttgtccgtgttcgaggatggtgcgctgcgc
ggctatcgcgagcagcgcgacctgccggatcgggtcggtacctcgcggctgtcgccgcac
ctgcatttcggcgaaatcgcgccgtggcgcatcgcccacgcgctggaaggcctgcgcagt
gccggtaccgatgctgacatcgatggctacctgcgccagcttggctggcgtgactttgcc
catcacctgctgcaccacttcccgaagacgcccaccgacaacctcaatccacgcttcgat
cgcttcccgtgggccagccccagtgccgcccagctgcacgactggcagcgcggcaatacc
ggcgtccccatcgtcgatgctggcctgcgcgagctctggcataccggctacatgcacaac
cgggtgcggatgatcgttgccagctacctgtgcaagcacctgcgcgcgcattggctgcac
ggtgcgcgctggttctgggacacgctggtggatgccgacctggccaacaacacgatgggc
tggcagtgggtggccggcaccggtgccgacgcggctccgtatttccgcgtgttcaatccc
gtcacacaggccgagaagttcgatccgcaggcgcgctacatcagccgctgggtgcctgag
ctggcggcgctgccggtaaaggcgcggttcgctccatggcagcatccgcacctgctggcc
gaacgcgcgccgggctacccacgcacgccgctggtggacctcgccgctggccgggatgcc
gctctggccgcctaccgtcagtcggcggcggggtaa
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