Stenotrophomonas indicatrix: DAIF1_18240
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Entry
DAIF1_18240 CDS
T07128
Symbol
fadN
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00071
Fatty acid degradation
sinc00362
Benzoate degradation
sinc00650
Butanoate metabolism
sinc01100
Metabolic pathways
sinc01120
Microbial metabolism in diverse environments
sinc01200
Carbon metabolism
sinc01212
Fatty acid metabolism
Module
sinc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DAIF1_18240 (fadN)
09103 Lipid metabolism
00071 Fatty acid degradation
DAIF1_18240 (fadN)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DAIF1_18240 (fadN)
Enzymes [BR:
sinc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DAIF1_18240 (fadN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
ApbA
DAO
Shikimate_DH
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QBR44260
LinkDB
All DBs
Position
complement(1974353..1976725)
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AA seq
790 aa
AA seq
DB search
MSNSLLVRRAAVLGAGVMGAQIAAHLTNAGVDTVLFDLPAKEGPADGIVLKSIANLGKLS
PAPLASKSLAEAITPANYETGLEQLKDCDLIIEAIAERMDWKQDLYKKIAPFVADHAVLA
SNTSGLGINKLADVLPEQLRHRFCGVHFFNPPRYMHLAELIPATTTDASVLEGLEAFLVT
TLGKGVVYAKDTPNFIGNRIGVFSILSTIHHTQEFGLGFDEVDGLTGPLVGRPKSATYRT
SDVVGLDTMAHVIKTMGDTLPNDPWHEFFKSPKWLDALIAKGALGQKTGAGIFRKVGKDI
VVLDLEKQDYRPADRAAAPEVVEILKIKNPAEKFAKLRESQHPQAQFLWATFRDLFHYSA
YHLADIAETARDVDLAIRWGYGWSLGPFETWQAAGWKQVAQWIADDIVAGKSMSNAPLPD
WVFDGRDGVHAAEGSYSPSRNAKLPRSSLPVYQRQRFPDPLLGEKFAPGETVFENDGLRM
WHDGDGIAVVSFKTKMNTVSDHVLDGLQECVTRAEKDFQGLVIWQQKEPFSAGADLAGAL
GLLQAGKVDQFEAMVHNFQRTSQRIKYSLVPVVAAVRGLALGGGCEFQMHSAKTVAFLES
YIGLVEAGVGLLPAGGGLKELAVRASQAAGPGGDVFAELKKTFETVAMAKVSNSAVNAQE
LGLLRSTDKVVFNSYEALYIAKAEARALAEAGYRPPLPARRIQVAGDVGIATFKMMLVNM
LEGRFISPYDYEIAERIATVLCGGKVDRGTLVDEEWLLTLERKHFVELAQQEKTQARIAH
MLKTGKPLRN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccaattccctgctagtccgccgcgccgccgtgctgggtgccggcgtcatgggtgcc
cagatcgccgcccacctcaccaatgccggcgtcgacaccgtgctgttcgacctgcctgcc
aaggaaggtccggccgatggcatcgtgctgaagtcgatcgccaacctcggcaagctgagc
ccggcgccgctggccagcaagtcgctggccgaagccatcaccccggccaactacgagacc
ggcctggagcagctgaaggactgcgacctgatcatcgaggcgatcgccgagcgcatggac
tggaagcaggacctgtacaagaagatcgccccgttcgtggccgaccacgccgtgctggcc
tccaacacctcgggcctgggcatcaacaagctggccgacgtgctgcccgaacagctgcgc
caccgtttctgcggcgtgcatttcttcaacccgccgcgctacatgcacctggccgagctg
atcccggccaccaccaccgacgccagcgtgctggaaggcctggaagcgttcctggtcacc
accctgggcaagggcgtggtgtacgccaaggacaccccgaacttcatcggcaaccgcatc
ggcgtgttctcgatcctgtccaccatccaccacacccaggaattcggcctgggcttcgac
gaagtggacggcctgaccggcccgctggtcggccgcccgaagtccgccacctaccgcacc
tccgacgtggtcggcctggacaccatggcccacgtcatcaagaccatgggcgataccctg
cccaacgacccgtggcatgagttcttcaagtcgccgaagtggctggatgcgctgattgcc
aagggcgcactgggccagaagaccggcgccggcatcttccgcaaggtcggcaaggacatc
gtggtgctggacctggaaaagcaggactaccgtccggctgaccgcgccgccgcaccggaa
gtggtcgagatcctgaagatcaagaacccggccgagaagttcgccaagctgcgcgagagc
cagcacccgcaggcgcagttcctgtgggcgaccttccgcgacctgttccactacagcgcc
taccacctggccgacatcgccgagaccgcgcgcgacgtcgatctggccatccgctggggc
tacggctggtcgctgggcccgttcgaaacctggcaggctgccggctggaagcaggtcgcg
cagtggatcgccgatgacatcgtcgctggcaagagcatgagcaatgcgccgctgccggac
tgggtgttcgatggccgcgatggcgtgcatgccgccgagggcagctacagcccgtcgcgc
aacgccaagctgccgcgttcgtcgctgccggtgtaccagcgccagcgcttccccgatccg
ttgctgggcgagaagttcgcgccgggcgagaccgtgttcgagaatgacggcctgcgcatg
tggcacgacggcgatggcatcgctgtggtcagcttcaagaccaagatgaacaccgtgtcc
gaccacgtgctggatggcctgcaggaatgcgtcacccgcgccgagaaggacttccagggc
ctggtgatctggcagcagaaggagcccttctccgccggtgccgacctggctggcgccctc
ggcctgctgcaggccggcaaggtcgaccagttcgaagcgatggtgcacaacttccagcgc
accagccagcgcatcaagtactcgctggtgccggtggtggctgcggtgcgcggcctggcc
ctgggtggcggctgcgagttccagatgcacagcgccaagaccgtggccttcctggaaagc
tacatcggtctggtcgaagccggcgtcggcctgcttccggcaggcggtggcctgaaggaa
ctggcggtgcgcgcatcgcaggccgccggcccgggcggtgacgtgttcgccgaactgaag
aagaccttcgaaaccgtagcgatggccaaggtgtccaactcggcggtcaacgcccaggaa
ctgggcctgctgcgcagcaccgacaaggtggtgttcaacagctacgaggccctgtacatc
gccaaggccgaagcacgcgccctggccgaagcgggctaccgtccgccgctgccggcacgc
cgcatccaggtggccggcgacgtcggcatcgccaccttcaagatgatgctggtcaacatg
ctggaaggccgcttcatcagcccgtacgactacgagatcgccgagcgcatcgccaccgtg
ctgtgcggcggcaaggtcgaccgcggcaccctggtcgacgaagagtggctgctgaccctt
gagcgcaagcacttcgtcgaactggcccagcaggaaaagacccaggcccgcatcgcgcac
atgctcaagaccggcaagccgctgcggaactga
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