Stenotrophomonas indicatrix: DAIF1_18830
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Entry
DAIF1_18830 CDS
T07128
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sinc03000
]
DAIF1_18830 (rutR)
Transcription factors [BR:
sinc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DAIF1_18830 (rutR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_41
HTH_22
HTH_36
DUF134
HTH_32
Motif
Other DBs
NCBI-ProteinID:
QBR44319
LinkDB
All DBs
Position
2039866..2040477
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AA seq
203 aa
AA seq
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MPRTPQRLTDRKREAIVRAAVEEFRSAGYEATSMDRIAAVAGVSKRTVYNHFPSKEELFA
LILEELWQSSVASVELPYRADQPLDVQLLQLLRQKLDLLGDANFIDLARVAMAEIIHSPE
RAQAIVCRMGEKESGVSAWIREAIADGRLRQVDPEFAGHQLQGLVKSFAFWPQVTMGQAP
LAQAERTRVAESAVAMFLGFYAV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaccccgcaacgccttaccgaccgcaagcgcgaggccatcgtccgcgcggcg
gtggaagagttccgttcggccggctacgaggcgaccagcatggaccgcatcgcggcggtg
gctggtgtctccaagcgcaccgtctacaaccacttcccgagcaaggaagaactgttcgcg
ctgatcctggaagagctgtggcagagcagcgtggccagcgtcgagctgccgtaccgcgcc
gaccagccgctggatgtgcagctgctgcagctgctgcggcagaagctggacctgctgggt
gatgccaacttcatcgatctggcacgggtggccatggccgagatcatccattcacccgag
cgcgcgcaggcgatcgtctgccgcatgggcgagaaggagagcggcgtcagcgcatggatc
cgtgaggcgattgccgatgggcggctgcgccaggtcgatccggaattcgccggccatcag
ctgcagggcctggtgaagagcttcgcgttctggccgcaggtgacgatgggccaggcgccg
ctggcgcaggccgaacgcacgcgcgtggccgagtcggccgtggcgatgttcctgggcttc
tacgcggtgtaa
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