Stenotrophomonas indicatrix: DAIF1_19040
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Entry
DAIF1_19040 CDS
T07128
Name
(GenBank) hypothetical protein
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DAIF1_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
CshA_NR2
GramPos_pilinBB
GEVED
OmpA
DUF7507
Motif
Other DBs
NCBI-ProteinID:
QBR44339
LinkDB
All DBs
Position
2058493..2064672
Genome browser
AA seq
2059 aa
AA seq
DB search
MWQSTTSRISAGGESVHPEKSAHPGRTGRWLAAGLLLLLLSVVLPSSAWAAAYATGGTSP
YRNTVLWLTWGGGTDLGTAGVTLNNGDTSSISMPVAAGINLSVSCSLANISGGGLLQSYR
PGNFSGDSLDDLYNVGGTGGANQLIAGISRSTGTSSFEINCVSTLGGAPYRLRGVVMADA
ESINNSGEFVEASALGTWNVVEMRKNLSAGAYNVTKSSSGGNSVIRFGPGNDNNTAAVTF
LNFDNAAHAPGNLAVNMGFSMRGGGTTAIAIGLLVPYADFGDAPQSYGDAMHVVDDLQFR
PDGLPVNATPTNINTAGYTPGGLAPPLTDFLGTMGPDTEQKSSYSADAKGDDNFPSGNPN
EENAWPASYVLTVMQAGTQISQPVACVGSGSVAGWIDFNRNGTFDPGERSNIAACSGGGA
NLSWTVPAQVSAGSSYVRLRYATNAAQIQQPTGVADDGEVEDHLITITAPALKVVKSNNA
TGGIWNYGQAGTQYTLTISNTTNVPTGNPPNVPAGVITVRDQLPAGIVPNWTGTLSSGSW
SCTASGQAVSCTSSQVLSAAGTAGDSSSFTLPVTVSASASGLLRNHASVGGGYDPFNGGN
PPAPGEACTDANHCTRSDVTVPVTRVSYAKRSNTAGPVAVGATVSYTVDVTIADGNSRDV
LTLTDTLGTGLDFASVTNAGGFTCNAANPLVCTLPAGTVPGTYSLTYAATVNAQASGQVV
NTVLGTGTDTPTCSSNCTTTTPVAAPRISVSKASATAGPVAVGDSVAYTVSVVVADARTT
AAVTLTDTLGTGLDFGGMTNAGGFICVPGNPLVCTLPAGTVPGSYAFSYTGIVNAQAVGQ
VRNAVVPSGPDNPSCVGSCDTTTPLASPQVSYAKLASTGGPVRVGDSIGYTLSVTVARSR
TTDVVTLTDTLGSGLDFSSVTSAGIFTCNAANPLVCTLPAGTVPGTYSLSYSATVNAQAT
GTVRNAVLGTGTDTPSCTTNCDTTTPVATPGVSYAKSVNSAGPVSVGDSLAYTLTTVVTN
SRTTDVVTLTDTLGSGLDFGSVTSAGAYTCNAANPLVCTLPAGTAPGSYSLSYSAVVNAQ
ATGQVTNAVLGSGGDNPSCTVNCDTTTPVAGSQIDYRKTSAAVGSVKVGDSIAYTLTAVV
SRSRTTAVFSLTDTMGQGLDFGTVTATTGFTCNAANPLVCTLPAATAPGTYTVNYTATVN
AQAKGSVSNAVLGSGTGTNTCTTDCTTTTPVLAATVTYRKSSSTASPVNIGDAVDYSVEV
VVANSQTTDVLTLTDTLGAGLDLQSVTQPGAFTCNASNPLVCTLPAGTAPGTYTLGYRAQ
VNAQASGSVRNAVLGSGGDTPTCTGTCSTEHVLAEPRVVLEKLSGPASGSEVRPGDRLRY
TLRATVERASLRQPLQLLDTPDTGLSVDTLPAGCVQQGTDIVCTLPAGTPVGQHEFVYQA
IVNQEARTEVLNRLRGQYPDGSPPPECATCETRHKVISDFALRITKTANPRLVKVGDLVR
YQLVVENVGSSHWRDGVVVDTPPPGFSYVDGSMRVADDDGAFSLGGSQTPLRIGTVDIAV
GRSATITYLLRVGAGVRAGNHINQAVATAGDGTPLSNVATAEVRMDADPLLEDSLVFGTV
FDDRDGDGWQDSAELTGVRVQGGFAPAAYVPGSTTLDRGDGPQPLADASAPLLHGVQVGV
VHGLASTSDTVESHQVVIRQRLRELSFTDDFVLESAQGHRLQLDAQGVATVQRSGEAAKG
LTAAEPAAHREIARVAEGYEVAYVIRNSGIQEQGIPGVRLATVEGLLIETDPFGRYHLAD
VHGGDARLGRNFIVKLDPATVPAGSGLTTENPLLRRVTQGVPTRFSFGVRLPPSPQAAAE
RAELALGEVLFAPGSSELRASYRPVLAKMAEVVDRYQGGDVVIAANGESQALAFARAVAV
RDALQAEVAEGSRAGLTVQLRTDVRDPHSLVAGVDAGGALLGNVLFDTDKAVIREEFKPL
LAAIAARLEQMGGGQVSLVGHTDVRGSHAYNQALGLRRANAVFEALRVQLSPAVQQRLRV
RNEETAATRAAAYQQEARR
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagtcgacgacgtcgcgcatcagcgcgggcggtgaatccgttcatcctgaaaaa
agtgcacatcctggccggaccgggcgatggctggccgccggtctgctgttgctgctgctg
tcggtggtgctgccatcgtcggcctgggctgcggcctacgcgaccggcggcaccagcccg
taccgcaacacggtgctgtggctgacctgggggggcggcacggacctgggcactgccggg
gtcacgctcaacaatggtgatacctcgtcgatctcgatgccggtggccgcgggcatcaac
ctcagtgtcagctgcagtctggccaacatcagtggcggcggactcctgcagagctatcgc
ccgggcaacttcagcggcgacagcctggacgacctgtacaacgtcggtggcactggcggc
gcgaatcagctgatcgcgggcatctcgcgcagcacgggcacctcctcgttcgaaatcaac
tgcgtctcgaccctgggcggcgcgccgtatcgcctgcgcggcgtggtgatggccgacgcc
gagtcgatcaacaacagcggcgagttcgtcgaagccagtgcactgggcacctggaacgtg
gtggagatgcgcaagaacctcagcgcaggtgcctacaacgtgaccaagtccagcagcggc
ggcaacagcgtgatccgcttcgggccgggcaacgacaacaacaccgctgcggtcaccttc
ctcaacttcgacaacgccgcacacgcgccgggcaaccttgcggtgaacatgggcttctcg
atgcgcggcggcggcaccaccgccatcgccatcggcctgctggtgccgtacgccgacttc
ggcgatgcgccgcagagctatggcgacgccatgcatgtggtggacgatctgcagttccgc
ccggacggcctgcccgtcaacgccacccccaccaacatcaacaccgcaggctatacgccg
ggtggcctggcgccgccgctgaccgatttcctcggcacgatgggtccggataccgagcag
aagagcagctacagcgccgatgcgaagggtgacgacaacttcccttcgggcaatcccaac
gaagagaacgcctggccggcgagctatgtgctgacggtgatgcaggccggtacccagatc
agccaaccggtggcatgcgtgggcagcggcagcgtggccggctggatcgacttcaaccgc
aacggcacattcgacccgggcgagcgcagcaacatcgctgcatgcagtggtggcggggcc
aacctgagctggaccgtgcccgcgcaggtaagcgcaggcagcagttacgtgcgcctgcgc
tatgcgaccaacgcggcgcagatccagcagccgaccggcgtggccgacgacggcgaagtg
gaagaccacctgatcaccatcaccgcacccgcgctgaaggtggtgaagagcaacaatgcc
accggcggcatctggaactacggccaggccggcacccagtacacgctgacgatcagcaac
accaccaacgtgccgaccggcaatccgccgaacgtgccggcgggtgtcatcactgtgcgc
gaccagttgccggcagggatcgtgccgaactggaccggtaccctcagcagtggcagctgg
agctgtacggcgagcggccaggcggtgagctgcaccagcagccaggtactgtcggcagcc
ggcaccgccggtgacagcagcagcttcaccctgccggtgaccgtgtccgcatcggcaagc
ggcctgttgcgcaaccacgccagcgtcggcggtggctacgatccgttcaatggtggcaat
ccgcccgcaccgggcgaggcctgcaccgatgccaaccattgcacccgcagcgatgtgacc
gttccggttacacgggtgagctacgcgaaacgctccaacaccgccggtccggtggcggtg
ggggcgacggtgagctacaccgtggatgtcaccattgccgacggcaacagccgcgacgtg
ctgaccctgaccgataccctcggcaccggtctggatttcgccagcgtgaccaacgcgggt
ggctttacctgcaacgcggccaatccgctggtgtgcacgctgccagcgggcaccgtgccg
ggcacctacagcctgacctatgcggccaccgtcaacgcgcaggccagcggccaggtggtc
aacacggtgctgggcaccggcaccgacactcccacctgcagcagcaactgcaccaccacc
acgccggtggcggcgccgcgcatctcggtgtccaaggccagcgctacggccggcccggtc
gcggtgggcgacagcgttgcctacacggtgagcgtggtcgtggccgatgcgcgcaccacc
gctgccgtcacattgaccgataccctgggcactggcctggacttcggcggcatgaccaat
gccggcggcttcatctgcgtgcccggcaatccgctggtatgcacgctgcccgccggcacc
gtgcccggcagctacgcgttctcctataccggcatcgtcaacgcacaggcggttggccag
gtacgcaatgccgtagtgccgagcggtccggacaatccgtcgtgcgtcggcagctgtgat
accaccacgccgctggccagcccgcaggtgagttacgccaagctggcctccaccggtgga
ccggtgcgggtgggcgacagcatcggctatacgctgagcgtgaccgttgcgcgttcgcgc
accaccgatgtggtcaccctgaccgatacgctgggcagcggcctggacttcagcagcgtg
accagcgcgggcatcttcacctgcaatgccgccaatccgctggtgtgcacgctgcctgca
gggacggtgccgggcacctacagcctgagctactccgccacggtcaatgcgcaggccact
ggcacggtgcgcaatgccgtgctcggcaccggcaccgacacgccctcgtgcacgaccaac
tgcgataccaccacgccggtggcgacgccgggcgtgagctatgccaagtcggtgaacagt
gccggccccgtgtcggtgggtgacagcctggcctacaccttgaccacggtggtgaccaac
tcgcgcaccaccgacgtggtgacgctgaccgatacgctgggcagcggcctggatttcggc
agcgtgaccagtgccggcgcctacacctgcaacgcggccaacccgctggtgtgcacgttg
ccggccggcactgcgccaggcagctacagcctgtcgtactccgcagtagtcaacgcccag
gccaccggccaggtgaccaacgcggtgctcggcagcggtggcgacaacccgagctgcacc
gtcaactgcgataccaccaccccggtggctggcagccagatcgactatcgcaagacctcg
gccgcggtcggctcggtcaaggtgggtgacagcatcgcctacaccctgaccgctgtggtc
agccgctcgcgcaccaccgctgtgttcagtttgaccgacacgatggggcagggcctggac
ttcggcacggtcaccgccaccaccggcttcacctgcaatgccgccaacccgctggtgtgc
acgttgccggccgccaccgcacctggcacctacacggtgaactacaccgcgacggtgaac
gcgcaggccaagggcagcgtcagcaacgccgtgcttggcagcggcaccggtaccaacacc
tgcaccaccgactgcaccaccaccaccccggtgctggcggcgacggtcacctaccgcaag
tcctccagcacggcatcgccggtcaacatcggcgatgcggtggactacagcgtcgaggtg
gtggtcgccaactcgcagaccaccgatgtgctcaccctgaccgataccctgggcgcaggc
ctggacctgcagtcggtgacccagccgggcgccttcacctgcaatgccagcaatccgctg
gtatgcacgctgccggcaggtaccgcgcccggcacctacacgctgggctatcgcgcgcag
gtcaacgcgcaggccagtggcagcgtccgcaacgcggtgctgggcagtggcggcgatacc
cccacctgcacgggaacctgcagcaccgagcacgtgctggctgagccgcgcgtggtgctg
gaaaaactgtccggccctgcaagtggcagtgaagtgcgtccgggtgaccggttgcgctac
accctgcgggccacggtcgagcgcgcctcgctgcgccagccgttgcagctgctggatacg
cccgatacgggcctgagcgtggacacgctgccggcaggctgcgtgcagcagggtaccgac
atcgtctgcaccctgccggccggtacgccggtggggcagcatgaattcgtctaccaggcc
atcgtcaaccaggaggcgcgcacggaggtgctcaaccgcctgcgcggccagtatccggat
ggatcgccaccgccggagtgcgccacctgcgaaacgcggcacaaggtgatctcggacttc
gcgctgcgcatcaccaagaccgccaacccgcggctggtgaaggtgggcgacctggtgcgc
taccagctggtggtcgagaacgtcggcagcagccattggcgcgacggcgtggtggtcgat
acgccgccgccgggcttcagctatgtggacggctcgatgcgcgtggccgacgacgacggt
gcgttctcgctgggcggtagccagaccccgctgcgcatcggcacggtcgacatcgccgtg
ggccgcagtgccaccatcacctacctgttgcgggtgggcgcgggcgtgcgtgccggcaac
cacatcaaccaggccgtggctactgccggcgacggcacgccgctgtcgaacgtggcgacc
gcagaggtgcgcatggatgccgatccgctgctggaagacagcctggtgttcggcaccgtg
ttcgatgatcgcgatggcgacggctggcaggacagtgcggaactgaccggtgttcgcgtg
cagggcggtttcgcgcctgccgcgtacgtgccgggttcgacaacgctggatcgtggcgat
ggaccgcagccgttggccgatgccagcgcgcccctgctgcatggcgtgcaggtgggcgtg
gtacacggcctggcgtctacgtcggacacggtcgagagccatcaggtggtgatccgccag
cgcctgcgcgaactgtccttcaccgatgatttcgtgctggaaagcgcccagggccatcgc
ctgcagctggatgcgcagggtgtggcaaccgtgcagcgcagtggcgaggcggccaagggc
ctgaccgcagccgagccggccgcgcatcgcgagatcgcgcgggtggccgagggctatgaa
gtggcctacgtgatccgcaacagcggcatccaggagcagggtattcccggcgtgcgcctg
gccaccgtagagggcctgctgatcgaaaccgatccgttcggtcgttaccacctggccgat
gtgcacggtggcgatgcgcggttgggccgcaacttcatcgtcaagctggacccggcaact
gtaccggcgggttccggactgaccaccgagaatccgttgctgcgtcgggttacccagggc
gtgccgacccgcttcagcttcggcgtgcgcctgccgccgtcgccgcaggcggccgccgag
cgcgccgaactggcgttgggcgaagtgttgttcgccccgggcagcagcgagctgcgtgcc
agctatcgtccggtgctggcgaagatggccgaggtggtcgatcgctaccagggcggtgac
gtggtgattgccgccaacggcgaaagccaggcgttggccttcgcccgtgcggtggccgtg
cgtgatgcgctgcaggccgaagtggctgaaggttcgcgcgctggcctgacggtgcagctg
cgtaccgatgtgcgcgatccgcactcgctggtcgctggcgttgatgccggcggcgcgctg
ctcggcaacgtgctgttcgacaccgacaaggcggtgatccgcgaggagttcaagccgctg
ctggctgccatcgccgcgcgcctggagcagatggggggcggccaggtcagcctggtcggc
cataccgatgtgcgtggcagccacgcctacaaccaggcgttgggcctgcgccgtgccaat
gccgtgttcgaagcgctgcgcgtgcagctcagccctgccgtgcagcaacgcctgcgcgtg
cgcaacgaggagaccgccgccacccgcgcggcggcctaccaacaggaggcccgccgatga
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