Stenotrophomonas indicatrix: DAIF1_19250
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Entry
DAIF1_19250 CDS
T07128
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DAIF1_19250 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sinc01007
]
DAIF1_19250 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinc03016
]
DAIF1_19250 (hisS)
Enzymes [BR:
sinc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
DAIF1_19250 (hisS)
Amino acid related enzymes [BR:
sinc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DAIF1_19250 (hisS)
Transfer RNA biogenesis [BR:
sinc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DAIF1_19250 (hisS)
Prokaryotic type
DAIF1_19250 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
HGTP_anticodon2
tRNA-synt_2d
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QBR44360
LinkDB
All DBs
Position
2087407..2088804
Genome browser
AA seq
465 aa
AA seq
DB search
MIKPRTPPGTLELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETE
RQVYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAEHEHELTFPFRRYQMQRVY
RGERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFAELRIGDFSIQLNNRKLL
RGFFESLGVAEGERQLAVLREVDKLDKRGPDYVRETLVGEGFGIPAEQVENILAFVAVRS
QGHADALAQLAALEDGAGSSEILRAGVAELREVLQLVQALGVPESAYCLNFSIARGLDYY
TGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLSRLFWQLREAGLIEG
IEASSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYAAKAGIRFVV
LAGEDELARGVVAVKDLLREQQFEVSRDELASTLQVELEQSRVMP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagccccgtaccccgcccggcacccttgaactgctgccgcgcgagcagattgcg
ttccagcgcatgctggacgtcatccgccgcaactacgagcgcttcgggttcctgccggtg
gagacgccggtgttcgagctgtccgatgtgctgctgaccaagtccggcggcgagaccgag
cgccaggtgtatttcgtgcagtccaccggcgcgctggccaacgctgctgaatccggcgat
cgttcgctgccggagatggcgctgcgcttcgacctgaccgtgccgctggcgcgttacgtg
gccgagcacgaacacgagctgaccttcccgttccgccgttaccagatgcagcgcgtgtac
cgcggcgagcgcgcccagcgcggccgcttccgcgagttctaccagtgcgacatcgacgtg
atcggcaaggacagcctgagcgtgcgttacgacgccgaagtgctggcggtcatccatgcg
gtatttgccgaactgcgcatcggtgacttcagcatccagttgaacaaccgcaagctgctg
cgcggcttcttcgaaagcctgggcgtggccgagggcgaacgacagctggcagtgctgcgc
gaagtggacaagctggacaagcgtggccccgactacgtgcgcgagacgctggtgggcgag
ggcttcggcattccggccgaacaggtcgagaatatcctggccttcgtcgccgtgcgttcg
cagggtcatgccgatgcgctggcacagctggcagcgctggaagacggtgcgggttcctcg
gagatcctgcgtgccggcgtggccgagctgcgcgaagtactgcagctggtgcaggcactg
ggcgtgccggaaagcgcgtactgcctgaacttctccattgcacgtggcctggattactac
accggcacggtgtacgagaccacgctgaccgaccacccgcagatcgggtcgatctgttcc
ggtggccgttatgaagacctggccagccactacagcaagtccaagctgccgggcgtgggc
atttccatcggcctgtcgcgcctgttctggcagctgcgcgaagctggcctgatcgagggc
atcgaggccagcagcgtgcaggcgctggtggcgctgatggacgagcagggcatgccgcag
tcgctggacatcgcccgccgcctgcgcgccggtggcatcaacaccgaagtgcagatggag
ccgaagaagatcggcaagcagttccagtacgcggccaaggccggtatccgtttcgtggtg
ctggctggcgaagacgagctggcgcgcggcgtggtggcggtgaaggacctgctgcgcgag
cagcagttcgaagtctcccgtgatgaactggccagcaccctgcaggtggaactggagcag
tcgcgggtcatgccgtga
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