Stenotrophomonas indicatrix: DAIF1_20020
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Entry
DAIF1_20020 CDS
T07128
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00061
Fatty acid biosynthesis
sinc00071
Fatty acid degradation
sinc01100
Metabolic pathways
sinc01212
Fatty acid metabolism
sinc02024
Quorum sensing
sinc04146
Peroxisome
Module
sinc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DAIF1_20020 (fadD)
00071 Fatty acid degradation
DAIF1_20020 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DAIF1_20020 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
DAIF1_20020 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sinc01004
]
DAIF1_20020 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinc04147
]
DAIF1_20020 (fadD)
Enzymes [BR:
sinc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DAIF1_20020 (fadD)
Lipid biosynthesis proteins [BR:
sinc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DAIF1_20020 (fadD)
Exosome [BR:
sinc04147
]
Exosomal proteins
Exosomal proteins of breast milk
DAIF1_20020 (fadD)
Exosomal proteins of breast cancer cells
DAIF1_20020 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
QBR44437
LinkDB
All DBs
Position
complement(2183706..2185382)
Genome browser
AA seq
558 aa
AA seq
DB search
MSLDRPWLQSYPKGVPAEIDVNEFHSVVSVFDASVAKYRDRPAYSSFGKTLTYGETDALV
EQFAAYLLGELKLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTARELKHQLV
DAGVTALVVVDNFGDTVEQVIADTQVKQVITTGLGDLLGAKGTIVNFVLKYIKKMVPNYH
LKGAIRFKQALKLGSRHTLPKVEIDHDDVAFLQYTGGTTGVAKGAMLTNRNLIANMQQAS
AWISASGIEMGKEWIITALPLYHIFALTANGLVFMKFGGCNHLITNPRDMKGFVKELKSV
RFTAITGVNTLFNGLLNTPGFDTVDFSSLKVTLGGGMAVQRAVAERWKKTTGVTLVEAYG
LTETSPAACINPLTLAEYNGSIGLPIPSTDACIKDDNGNILALGEVGELCIRGPQVMKGY
WQRPEETAKAIDADDWLHTGDMAKMDEHGFFYIVDRKKDMILVSGFNVYPNEVEDVIAMM
PGVLEVAAVGVPDEKSGEVVKVVIVKKDPNLTAEMVKEHARANLTGYKHPRIVEFRKELP
KTNVGKILRRELRDTPAP
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgtccctggctgcagagctatccgaaaggcgttcccgccgaaatcgac
gtcaacgagttccattcggtagtttcggtcttcgacgcctccgtcgcgaagtaccgcgac
cgaccggcctactccagtttcggcaagaccctcacctacggtgagaccgacgccctggtt
gaacagttcgccgcttacctgctgggcgagctgaagctcaagaagggcgaccgcgtcgcc
ctgatgatgcccaactgcctgcaatacccgatcgccaccttcggcgtgctgcgtgccggc
ctgaccgtggtcaacgtcaacccgctgtacaccgcgcgcgagctgaagcatcagctggtc
gacgccggcgtgaccgcgctggtggtggtggacaacttcggcgataccgtcgaacaggtc
atcgccgatacccaggtcaagcaggtcatcaccaccggcctgggcgacctgctcggcgcc
aagggcacgatcgtcaacttcgtgctcaagtacatcaagaagatggtgcccaactaccac
ctgaagggcgcgatccgcttcaagcaggcgctcaagctgggcagccgccacaccctgccg
aaggtcgagatcgaccacgacgacgtggcgttcctgcagtacaccggtggcaccaccggt
gtggccaagggcgcgatgctgaccaaccgcaacctgattgccaacatgcagcaggcctcg
gcctggatcagcgcatcgggcatcgagatgggcaaggaatggatcatcaccgccctgccg
ctgtaccacatctttgcgttgacggcgaacggcctggtcttcatgaagttcggtggctgc
aaccacctgatcaccaacccgcgtgacatgaagggcttcgtcaaggagctcaagtcggtg
cgcttcaccgcgatcaccggcgtcaacacgctgttcaacggcctgctcaacacccccggc
ttcgacaccgtcgatttctcctcgctgaaggtgaccctgggcggcggcatggccgtgcag
cgtgcggtcgccgagcgctggaagaagaccaccggcgtcaccctggtcgaggcctacggc
ctgaccgagacctcgccggcggcctgcatcaacccgcttaccctggccgaatacaacggc
tcgatcggcctgccgatcccctccaccgatgcctgcatcaaggacgacaacggcaacatc
ctggcgctgggtgaagtgggcgagctgtgcatccgcggcccgcaggtgatgaagggctac
tggcagcgcccggaggaaaccgccaaggccatcgacgccgacgactggctgcacaccggc
gacatggcgaagatggacgagcacggcttcttctacatcgtcgaccgcaagaaggacatg
atcctggtgtccggcttcaacgtgtaccccaatgaagtcgaggacgtgatcgcgatgatg
ccgggcgtgctggaagtggccgcggtcggcgtaccggacgagaagtccggcgaggtggtc
aaggtggtcatcgtcaagaaggacccgaacctgaccgccgagatggtcaaggagcacgcc
cgggccaacctgaccggctacaagcaccccagaatcgttgaattccgaaaagagctgccg
aagaccaacgtcggcaagatcctgcgtcgcgaactccgcgacacgcccgccccgtaa
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