Stenotrophomonas indicatrix: DAIF1_22050
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Entry
DAIF1_22050 CDS
T07128
Symbol
rcsC_10
Name
(GenBank) sensor histidine kinase RcsC
Organism
sinc
Stenotrophomonas indicatrix
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
Response_reg
HATPase_c_2
PAS_8
PAS_4
Radial_spoke_3
PAS
Motif
Other DBs
NCBI-ProteinID:
QBR44640
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Position
2425810..2429142
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AA seq
1110 aa
AA seq
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MLTPSIVLFACIAWTVLLFGVALWGERQGHRLSKVWPAIYALSLGVHCTAWTYYGAASQG
VQWGFPIPPTLIGMALIFAFGLPFLVRLGRLAKQHNSATIADLVVARLRADQGLGITITL
VALFGIIPYIALQLKAVSQGLAALLGDQFAPVGWQLDVSFWFALTMAAFTTLFGARKASA
TEHNRGIVVALGLESLLKLTALLAIGLYAALSVHKAGTPLLEKMAHLPPPAVVPDYLTMV
ALGAMAAFTLPHQFHVGVVELRQSSDLKTARWLFPVYLLLIGLPSVPMALAGAAQLPPSM
TPDLYVLALPQERGHHLLALLAYLGSLSAATGMMILSGLTLSIMLGNHGVGSRLLSGVNG
FNTGADLRPRVLAFRRAGILAVFLMSWLYSRAMSGTEALSDFGLMSFTALSQLAPAVLLA
VYRPRTPSPAIIAGIVLGSLVWLWLVLLPMVLPAPLASAGPDGLHWLAMFSLRMQPGHIA
ISMGASLAVNLVTVVLVSRAVRPSVPRQRDAVAAASLRKTAGRFLGQERARQLMDGHAGQ
MLDDDRVTAIERELTAVVGAGMARLLVEAARDGGAAPLDAVTRAVGEATQVLRFNQRLLE
AALENMSQGISVVDAQLQLVAWNSRYAALFKFPPELLQVGQPVSNLTAWALGQLKIGDTP
GDSRDKALQRRVVHMRRGTPHLSERIFPDNTIVEIRGNPMPGGGYVATFTDVTAFRRAED
ALKRSNETLERRVQDRTARLEQAVHEAERANVAKTRFLTAVGHDLIQPLHAAQLLTDAMS
QHIESEFLDSFLRQIRGALDSTDDLLSGLLDISRLEAGGLVADPRPFALSTVLEPLAQEF
AVLAAARGLQFRHVRTRVWVHSDPLLLRRVLQNFLANAIRYTRRGGVLLGVRRHGQALSI
GVHDSGPGIAPEQQAVVFEEFHRGDRSNGQGLGLGLTIAHRIADLLHAPLELQSELDRGS
AFSITVARAAPPEAPRTEPAAGNSSIKGIRVLVVDNDAEALEAMRLMLLAWGCDVIAARD
VAALGASAHEAALWLFDYHLDEGDTGVALWKRLVTVHGARPTVILSADTGNDTREAVRSV
GLSLLNKPFKPLALRWAINHLLATASTERT
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgccctccatcgtcctgttcgcctgcatcgcgtggaccgtgctgctgttcggc
gtcgccctgtggggggaacgccaggggcatcggctgtcgaaggtatggccagccatctac
gcgctgtcactgggcgtgcactgcacggcgtggacctactacggggccgcctcgcagggc
gtgcagtggggcttcccgatcccgccgacactgatcggcatggccctcatttttgccttc
ggcctgccgttcctggtgcggctggggcgattggccaagcagcacaacagtgccaccatc
gccgacctggtggtcgcgcgcctgcgcgccgaccaagggctgggcatcaccatcaccctg
gtcgcgctgttcggcatcattccctacattgcactgcagctgaaagcggtcagccagggc
cttgccgccctgctcggtgatcagttcgcacccgttggctggcagctggacgtgtcgttc
tggttcgcgctgacgatggcggcgttcaccaccctgttcggcgcacgcaaggcgtcggcg
accgaacacaaccgcggcatcgtggtcgcgctgggcctggaatcgctgttgaagctgacg
gcactgctggccattggcctgtatgccgcgctatcggtgcacaaggccggcacgccgctg
cttgagaagatggcgcacctgccgccgccggcggtggtgccggattacctgaccatggtg
gcgctcggtgccatggccgcgttcaccctgccccatcagttccatgtgggcgtggtcgag
ctgcgccagtcgtcggacctgaagacggcgcgctggctgttcccggtctacctgctgttg
atcggcctgccgtcggtgccgatggcactggccggtgccgcgcagctaccgccctcgatg
acgccggatctgtacgtgctggccctgccgcaggagcgcggccatcacctgctggcactg
ctggcatacctgggcagtctgagtgccgccaccggcatgatgatcctgtccgggctgacc
ctgtcgatcatgctcggcaaccacggtgtgggctcgcgcctgctgagcggcgtcaatggc
ttcaacaccggcgcggatctacgaccgcgggtgctggccttccggcgcgccggcatcctc
gccgtgttcctgatgtcgtggctgtacagccgtgcgatgagcggcaccgaggcgctcagc
gatttcggcctgatgtcgttcaccgcgctctcgcagctggcaccggcggtgctgctggcg
gtgtaccgtccgcgcacgccctccccggccatcatcgccggcatcgtactgggctcgctg
gtctggttgtggctggtgctgctgcccatggtgctccctgcaccgctggcgtcggccggt
cccgacggactgcactggctggcgatgttctcgctgcgcatgcagccgggccatatcgcc
atcagcatgggcgccagcctggccgtcaacctggtaaccgtggtgctggtgtcacgcgcg
gtgcgtccttctgtgcctcggcagcgcgacgcggtggccgctgcatcgttgcgcaagacg
gctggtcgcttcctcggccaggaacgggcacgccagctgatggacgggcacgccgggcag
atgctggacgacgaccgggtgactgccatcgagcgcgaactgaccgccgtggtcggtgca
ggcatggcgcggctgctggtggaggcggcacgcgatggtggcgctgcgccgctggacgct
gttacccgcgcggtcggtgaagccacccaggtgctgcgcttcaaccagcgcctgctggag
gccgccctggagaacatgagccagggcatcagcgtggtcgatgcgcagctgcagctggtg
gcctggaacagccgctacgccgcgctgttcaagttcccgccggagctgctgcaggtgggg
cagccggtgtcgaacctgacggcgtgggcactgggacagctgaagatcggcgacacccct
ggtgactcgcgcgacaaggcgttgcagcggcgggtggtgcacatgcggcgcggcacgccg
cacctttccgagcggattttcccggacaacaccatcgttgagatccgaggcaacccgatg
cccggtggcggctatgtggccaccttcaccgatgtcaccgcgttccggcgggcagaggac
gcgctcaagcgcagtaacgaaaccctggagcgccgcgtgcaggaccgcaccgcccggctg
gagcaggccgtgcatgaagccgagcgcgccaacgtggccaagacccgcttcctgaccgcg
gtcggccatgacctgatccagcccctgcatgcggcgcagctgttgaccgacgccatgtcg
cagcacatcgaatcggaattcctggacagtttcctgcgccagattcgcggcgcgctggat
tccaccgacgatctgctgtcgggcctgctggatatttcgcgactggaagccggtgggctg
gtggccgatccgcgcccgttcgccttgtcgaccgtgctggagccgcttgcgcaggagttc
gcggtgctggccgcggcacgcggcctgcagttccgccatgtgcgcacccgcgtgtgggtg
cacagcgacccgttgctgctgcgccgcgtactgcagaacttcctggccaacgccatccgc
tacacccgccgtggcggcgtactgctgggcgttcgccggcacggccaggcactgtcgatc
ggcgtgcatgacagcggccccggcatcgcgccggagcaacaagccgtggtgttcgaggaa
ttccaccgtggcgaccgcagcaatggccagggcctcggtcttggcctgaccatcgcgcac
cgcattgccgacctgctgcatgcaccgttggaactgcaaagcgaactggatcgcggctcg
gccttctccatcaccgtggcgcgtgcagcgccgcctgaggccccccgcactgagcccgcc
gctggcaacagcagcatcaagggcatccgcgtgctggtggtcgacaacgatgcggaggcg
ctggaggcaatgcggctgatgctgcttgcctggggctgcgatgtcatcgcggcgcgtgat
gtcgctgcgctgggcgcgtccgcacatgaggcggcactgtggctgttcgactaccacctt
gatgagggcgataccggcgtcgcactgtggaagcgcctcgtcaccgtgcatggcgcgcgg
ccgacggtgatcctcagcgccgataccggcaatgacacgcgcgaggcggtacgcagtgtg
ggcctgtcactgctgaacaagccgttcaagccgctggcgctgcgctgggcgatcaaccat
ctgctggcaacggccagcacggaaaggacctga
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