Stenotrophomonas indicatrix: DAIF1_23110
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Entry
DAIF1_23110 CDS
T07128
Symbol
rhaS_3
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K07506
AraC family transcriptional regulator
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sinc03000
]
DAIF1_23110 (rhaS_3)
Transcription factors [BR:
sinc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DAIF1_23110 (rhaS_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QBR44745
LinkDB
All DBs
Position
2533823..2534740
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AA seq
305 aa
AA seq
DB search
MPALADQLHREATLPSDGTVTSEDGAIVLLRHGFQASEGPMGNPHQLRLGLALAGGGNLY
QRTTAGVLQAPWHPGQFNVVLPGDRGHYASPAVELLGMAIDTAQWRDAPGGFPDIHALSL
RLHRDPVIAAVLHALWSSAQADASVPGFLQYGAEVVVRRLAQLAGQPPARPRMAAPLSSR
QLRQLQDFIDEHRSQSLDVAALADVLGMEPTTFSRALRAATGMPPYAYLTQRRMHWAQYA
LSKGQRVTEVALACGYANPSKFAAAFQRVAGCTPSIWAAQGTGRQEAIRRTGVDPASASR
GRRNR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctcgccgaccagttgcaccgggaagccaccctgcccagtgatggcaccgtg
accagcgaggacggcgcgatcgttctgctgcgccatggcttccaggccagcgaaggcccc
atggggaatccgcaccagctgcggctgggcctggcgctggccggtggcggcaacctgtat
caacgcaccactgccggggtactgcaggcgccttggcatccgggccagttcaacgtggta
ctgcccggcgatcgtggacactacgccagcccagccgtggagctgctgggaatggccatc
gataccgcgcagtggcgtgatgcgcctggcggcttcccggacatccatgccctttccctg
cggctgcatcgcgacccggtcatcgctgccgtactgcacgcgctgtggtccagcgcgcag
gctgacgccagcgtgcccggcttcctgcagtacggcgcagaagtcgtggtgcggcggttg
gcgcagcttgccggccaaccgcccgcccggccgcggatggctgcaccgctgtcatcgcgg
caactgcgccagctgcaggacttcatcgatgaacaccgttcccagtcgctggatgtcgca
gcgctggcagacgtactcggcatggaaccgaccacgttcagccgcgccctgcgcgccgct
accggcatgccaccgtatgcctacctgacccagcgccggatgcactgggcgcagtacgca
ctgtccaaggggcagcgcgtcaccgaggtcgcgctggcctgcggctacgccaatcccagc
aagttcgcggcggccttccagcgcgtggccggttgcacgcccagcatctgggccgcgcaa
ggcaccggccgccaggaagctattcgtcgaacgggcgttgacccagcgtctgcgtcacgt
ggtcgacgaaacaggtga
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