Stenotrophomonas indicatrix: DAIF1_24620
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Entry
DAIF1_24620 CDS
T07128
Name
(GenBank) bacterial type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DAIF1_24620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sinc02044
]
DAIF1_24620
02035 Bacterial motility proteins [BR:
sinc02035
]
DAIF1_24620
Secretion system [BR:
sinc02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
DAIF1_24620
Bacterial motility proteins [BR:
sinc02035
]
Pilus system
Pilus assembly proteins
DAIF1_24620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
DUF2608
Dicistro_VP4
Motif
Other DBs
NCBI-ProteinID:
QBR44896
LinkDB
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Position
2708407..2709765
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AA seq
452 aa
AA seq
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MTERRHRLRPTVRQRWLALLLVLLAPGASVAADDLLLQTREQRPWTLPADLERVAIADPG
VADIVMLRGARQALLVGKAPGTTTLLLWHRKQSEPQRVQVRVQSAVQGAADAGSSGLVFT
QQDQQGLLQGSSDSVLAHMQEQKTAVMALGKDGSLADASTISSGGVVQVEVKVVEFNKTA
LKQIGINFQNRNGGFAYGFARPGGQLPGNTGILPGMKEGESSNESESPISSAFRLVFGST
KGLWNADVDLLQANGMARVLAEPTLVALSGQSASFLAGGELPILEPQGLGTTTVTYKPFG
IGLTVTPTVLSPNRIALKVAPEASDLDYTNAIALNGVQIPSITTRRADTTVELGDGESFV
IGGLVSSTVASTVNKIPLLGDLPIIGTFFRNFDYKRQDKELVIIVTPRLVQPIARNTELP
LPGDREAKPNMPEWGAWLLGPISRDPVPGFSR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgtcgccaccgcctacgccccactgtccgccagcgctggctggccctgctg
ctggtgctgctggcaccgggtgcgagcgtggctgccgacgatctgttgctgcagacccgc
gaacagcggccatggacactgccggccgacctggaacgggttgccatcgccgaccccggc
gtagctgacatcgtgatgctgcgcggcgcacgccaggcgctgctggtaggcaaggccccc
ggcaccaccaccctgctgctctggcatcgcaagcagagcgaaccgcagcgcgtgcaggtg
cgggtgcagagtgccgtgcagggcgccgccgatgccggctccagcggactggtgttcacc
cagcaggaccagcaggggctgctgcagggaagcagcgacagcgtgctggcgcacatgcag
gagcagaagaccgcggtgatggcgctcggcaaggacggcagcctggccgatgcctccacc
atcagcagcggcggcgtggtgcaggtcgaggtgaaggtggtcgagttcaacaagaccgcg
ctgaagcagatcggcatcaacttccagaaccgcaacggtggtttcgcctatggattcgcg
cggccgggcgggcagctgccaggcaacaccggcatcctgcctggcatgaaggaaggtgag
tcgagcaacgaaagcgagtcaccgatctcctcggcgttcaggctggtgttcggttcgacc
aagggcctgtggaacgccgatgtcgacctgctgcaggccaacggcatggcgcgcgtgctg
gccgagcccactctcgtcgcgctgtccgggcagagcgccagcttcctggccggtggcgaa
ctgccgatcctggagccgcaggggctcggcacgaccacggtcacctacaagcccttcggc
atcggcctcaccgttactcccacggtgctctcaccgaaccgcattgcgttgaaggttgcc
ccggaagccagcgacctggactacaccaatgcgatcgcgctcaacggcgtgcagatccct
tcgatcaccacccgccgcgccgacaccaccgtcgagctaggcgatggagagagtttcgtc
atcggcggtctggtcagctccaccgtggcctcgacggtcaacaagattccgctgctcggc
gacctgccgatcatcggtacgttcttccgcaacttcgactacaagcgccaggacaaggaa
ctggtgatcatcgtcaccccgcggttggtacagccgattgcccgcaataccgaactgccg
ctgcccggcgatcgcgaagccaagccgaacatgcccgaatggggcgcgtggctgcttggc
ccgatcagccgcgatccggttcccggtttctcgcgctga
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