KEGG   Stenotrophomonas indicatrix: DAIF1_26230
Entry
DAIF1_26230       CDS       T07128                                 
Symbol
rep_2
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sinc  Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:sinc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sinc03400]
    DAIF1_26230 (rep_2)
Enzymes [BR:sinc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DAIF1_26230 (rep_2)
DNA repair and recombination proteins [BR:sinc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DAIF1_26230 (rep_2)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Helicase_IV_N AAA_30 Zn_ribbon_Top1 AAA_12 ResIII PLU-1 Paramyxo_ncap ILEI
Other DBs
NCBI-ProteinID: QBR45050
LinkDB
Position
2872435..2875188
AA seq 917 aa
MEWRPSGWGQRLTRSAHWLLRLEGEYIEIRMGGKHYRQHVDDDARVRIIPGLFWARVELQ
TEDHHTVSVDGLPNRQASQLSAAVQQVMFTCTTRGRKALFADILAQIYCWLAEADALTDR
ASADRRWITHEQQQALLAERPALPLQPSELQQLFLDDAVHEDLHAHSHRAALDALRDWEL
DWPSVWAEANASMATRELVLARNFLQRVESKPLTEEQARAVICFDNRVQVVASAGSGKTS
TMVAKAAYAIDRGFVAPERIVMLAFNKDAAKELEERAQRSFERLGMGDTVVEARTFHALG
LSIIAKATGRKPDIPEWAVEATLGFNKLAELVDDLKDRSTHFRTQWDMFRLVFGRDLPPL
GTQMLADGYDRDGTPYIRTLQGERVKSLEECVIADWLFYNGVAYNYGRRYEFDTATDTHR
QYRPDFYYPDAKLYHEHFALDADGQPPKHFDNYADGVRWKREQHAARGTALVETTSFGLR
SGEALHHLSEQLGESRIELDPNPDRELPDTGAKPMPDADLIGLMRTFIAHTKSNCLSLED
MAERLRQMPEDQFKERYRRFLEIAGPVFQAWDDALADERSIDFEDMLNMAAGLLEQGHYE
SSYELVMADEFQDASRARARLCRALVNRPGRYLFAVGDDWQSINRFAGADVSVMTGFREW
MGHGQVLKLEQTFRCPQALCDVSSRFISRNPAQIAKEVRSATPTMGPVLQAFQMNRREEL
QDGVRQYLAKLHQQLLSGAVPQGRDGRVSVFVLGRYRADRGVVPSDWKTTFGSTMDVEFL
TAHRSKGREADYVILPGMINRSFPSLRSDDPVLSLAMPDGDTYPLSEERRLFYVALTRAR
RSVAMFTLLGKHSPFLDELVNEGAVEVTGISGTAINDERCPVCKVGVFVDRTGPHGPFRS
CSSYPLCHSKPKGGSRG
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggaatggcgcccctcgggctggggccagcgtttgacccgttcagcacactggttgctg
cggctggaaggcgaatacatcgagattcgcatgggtggcaagcactaccgccagcacgtg
gacgatgatgcgcgcgtgcggatcattccgggcctgttctgggcccgggtcgagctgcag
actgaagaccatcacacggtgtccgtcgatggcctgcccaaccgccaagcatcccagctt
tcggccgccgtgcagcaggtcatgtttacctgcacgacccgcggtcgcaaagcgctcttt
gcagacatcctcgcgcagatctactgctggctggccgaggcagacgccctgaccgaccgc
gccagcgccgaccgccgatggatcacccacgaacagcagcaagcactgctggccgagcgc
cccgccctgcccctgcagccgtccgagctgcagcagctgttcctcgacgacgccgtacac
gaagacctgcacgcgcacagccaccgtgccgcgctggacgccctgcgcgactgggaactg
gattggccatctgtctgggccgaggccaacgcgtccatggcaacgcgcgagctggtgctg
gccaggaacttcctgcaacgggtggagagcaagccgcttaccgaagaacaagcccgcgcg
gtcatctgtttcgacaaccgcgtgcaggtggtcgcctcagccggctccggcaagacctcc
actatggtggccaaggctgcttacgctatcgaccgtggctttgtggcccccgagcgcatc
gtgatgctggccttcaacaaggatgccgccaaagagctggaagaacgggcacagcgatcc
ttcgagcggctaggcatgggcgataccgtggtggaggcgcgcactttccatgcacttggc
ctgtccatcatcgccaaggcgacggggcgcaagcccgatattcccgaatgggccgtcgaa
gcaacgctgggcttcaacaagctggccgagctggtagacgacctgaaggaccgctcgacc
cacttccgcacccagtgggacatgttccggctggtattcgggcgcgacctgccgccgctg
ggcacgcagatgctggccgatggctacgaccgcgatggcaccccctacatccgcaccctg
caaggtgagcgggtgaagagcctggaagagtgcgtgattgccgattggctgttctacaac
ggcgtggcctacaactacgggcggcgctacgaattcgataccgccaccgatacccatcgc
caatatcgcccggacttctattatccggacgccaagctgtatcacgagcacttcgcgctg
gatgccgacggccagccgccgaagcatttcgacaactacgccgatggcgtgcgctggaaa
cgcgagcagcatgccgcacgcggtaccgcgctggtcgagaccacctcgttcgggctacgc
agtggcgaggccctgcaccacctatcggaacaactgggcgaatcacgcatcgaactggac
cccaacccggaccgcgaactgcccgataccggcgccaagcccatgcccgatgccgatctg
atcgggctgatgcgcactttcattgcacacaccaagagcaactgcctgagcctggaagac
atggccgagcgtctgcggcagatgcccgaggatcagttcaaggaacgttaccggcgcttc
cttgaaatcgcggggcctgtgttccaggcgtgggatgacgcgctggcggacgaacgcagc
atcgacttcgaagacatgttgaacatggccgccgggctgctggaacagggccactatgag
tcgtcctacgagctggtgatggccgacgaattccaggacgcctcgcgcgcccgcgcccgc
ttgtgccgcgctctggtcaaccgcccgggccgctatctgtttgccgtaggcgacgactgg
cagtcgatcaaccgcttcgccggcgccgatgtttcagtgatgaccggtttccgcgaatgg
atggggcacggccaggtgctgaaactggagcagacgttccgctgcccacaggcactgtgt
gatgtttccagccgcttcatcagccgcaatccggcgcagatcgccaaagaagttcgttct
gctacgccgacaatgggcccggtgctgcaggcgttccagatgaaccggcgtgaggagctg
caggatggtgttcgccagtaccttgccaagctgcaccagcagctgttgtcaggtgcggtt
ccgcagggacgcgacgggcgcgttagcgtttttgttctggggcgctaccgcgcggatcgc
ggtgtagtgccttcggattggaagacgaccttcggcagcacgatggatgtcgagttcctc
acagcacatcgatcgaaggggcgcgaggcggactacgtgatcctgccgggcatgatcaat
cgcagcttcccgagcctacgctcggatgacccggtgctttcgctggcaatgccggatggt
gatacctatccactgagcgaagaacgacggttgttctatgtcgcgctgacgcgtgcgcga
cggtcggttgcgatgttcactctgctggggaagcactcaccgttcctggacgagctggtg
aacgaaggtgccgtagaggtcaccgggatttcagggacggctatcaacgacgagcgctgc
ccagtatgcaaggtgggggtgtttgtcgacagaacgggaccgcatgggcctttcaggtca
tgctccagttacccgttgtgccatagcaagccgaaaggtggttctcgtgggtaa

DBGET integrated database retrieval system