Stenotrophomonas indicatrix: DAIF1_26370
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Entry
DAIF1_26370 CDS
T07128
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DAIF1_26370 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sinc01007
]
DAIF1_26370 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinc03016
]
DAIF1_26370 (serS)
Enzymes [BR:
sinc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DAIF1_26370 (serS)
Amino acid related enzymes [BR:
sinc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DAIF1_26370 (serS)
Transfer RNA biogenesis [BR:
sinc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DAIF1_26370 (serS)
Prokaryotic type
DAIF1_26370 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Cep57_CLD_2
CENP-F_leu_zip
ATG16
Motif
Other DBs
NCBI-ProteinID:
QBR45063
LinkDB
All DBs
Position
complement(2885647..2886927)
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AA seq
426 aa
AA seq
DB search
MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIG
QAKAKGEDVSAIMAEVAAFADELKASEVALDELREKIDAISMGIPNLPADDVPAGADESE
NVEQSRWGTPRQFDFKVLDHVELGARNKWLDGETAAKLSGSRFTVLRGPIARLHRALAQF
MLDLHSGEHEYQETNVPVIVNADSLYGTGQLPKFEEDMFITQLGEQKRYLISTSEISLTN
IARDEILDAERLPLRMTAHSLCFRSEAGSGGRDVRGMIRQHQFEKVELVSICRPEDSDAE
HQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQETYREISSCSNCGD
FQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVMENYQNADGSITVPEALRPYMG
GIETIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatccagccctgctccgccaccagcccgccgacctcgccgaacgcctgcgcacc
agccgcggcttcgagctcgacgtgtctgccctggagtcactggaggccgatcgcaagcgc
atccaggtgcgtacccaggagctgcagagcctgcgcaacagccgttccaaggccatcggc
caggccaaggccaagggcgaggacgtttcggccatcatggccgaggttgccgcgttcgcc
gatgagctgaaggcctcggaagtggccctggacgagctgcgcgagaagatcgacgccatc
tcgatgggtatcccgaaccttccggctgatgacgtgccggccggtgccgatgaaagcgag
aacgtcgagcagtcgcgctggggcaccccgcgccagttcgacttcaaggtgctggaccac
gttgagctcggcgcccgcaacaagtggctggacggcgagaccgccgccaagctgtccggt
tcgcgcttcaccgtgctgcgtggcccgatcgcccgcctgcatcgcgccctggcccagttc
atgctcgacctgcacagcggcgagcacgagtaccaggaaaccaatgtgccggtgatcgtc
aacgccgacagcctgtacggcactggccagctgcccaagttcgaagaggacatgttcatc
acccagctgggtgagcagaagcgttacctcatctcgacctcggaaatctcgctgaccaac
atcgcccgcgacgagatcctcgacgccgagcgcctgccgctgcgcatgaccgcccattcg
ctgtgcttccgttccgaagccggcagcggtggccgcgacgtgcgcggcatgatccgccag
catcagttcgagaaggtcgagctggtttcgatctgccgcccggaagacagcgacgccgaa
caccagcgcatgacccgctgcgccgaagtggtgctggagaagctgggcctgccgtaccgc
aaggtgctgctgtgcaccggcgacatgggcttctcggccatcaagacctacgacctggaa
gtctggctgccgtcgcaggagacctaccgcgagatttcctcgtgctcgaactgtggtgac
ttccaggcccgccgcatgcaggcccgctggcgcaacccggccaccggcaagccggagctg
gcgcacacgctgaacggctcgggcgtggccgtcggccgcgcgatgatcgcggtgatggag
aactaccagaacgccgacggcagcatcaccgtgcctgaagccctgcgcccgtacatgggc
ggcatcgaaaccatcggctga
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