Stenotrophomonas indicatrix: DAIF1_26770
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Entry
DAIF1_26770 CDS
T07128
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinc03032
]
DAIF1_26770 (gyrA)
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_26770 (gyrA)
Enzymes [BR:
sinc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DAIF1_26770 (gyrA)
DNA replication proteins [BR:
sinc03032
]
Prokaryotic type
DNA Topoisomerases
DAIF1_26770 (gyrA)
DNA repair and recombination proteins [BR:
sinc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DAIF1_26770 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QBR45103
LinkDB
All DBs
Position
complement(2928206..2930920)
Genome browser
AA seq
904 aa
AA seq
DB search
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN
KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT
NIPPHNLTESINACIALIDNPEIDIDGLMEFIPGPDFPTAGIINGTAGIIAGYRTGRGRV
RIRAKADVEVADNGRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRREV
VTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPAEARERMLARLWEPGLVG
SMLGAAGAEASRPDDLPKGVGLIEGGYQLTEIQATQILEMRLHRLTGLEQDRLTEEYKQL
LEVIAGLIHILEDPDRLLQVIREELINVRAEFGDERRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYVKRQPVSAYRAQRRGGRGRSAASTKEEDFIEQLWLVNTHDTLLTFTSSGKVFW
LPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPVREYADGQFVFFATKNGTVKKTPLG
EFAFRLARGKIAINLDEGDALVGVGLTDGERDILLFASNGKTVRFGEDKVRSMGRTATGV
RGIRMPAGEEVVSLIVAESAGGIEDENEDDNGVEEAVANGDALIEGADDANLRYILTATE
NGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGTDDEVLLISDGGTLVRTRG
SEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIDEDEDEVAAAAPATTDGAPAAASSED
AAQE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccaaggaaatcatccaggtcaacctggaagacgagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtggggcgcgcgctgccagatgcgcgcgatggc
ctcaagccggtgcatcgtcgtgtgctgtttgcgatgaatgaactcaacgcgcacagcaac
aagccctacttcaagtcggcacgtatcgtcggtgacgtcatcggtaagtaccacccgcat
ggcgaccagtcggtgtacgacacgctggtgcgattggcacagccgttctcgctgcgctac
atgctggtcgatggccagggtaacttcggttcggtcgacggcgactccgccgcggcgatg
cgatacaccgaggcgcgcatgtcgcggctcgcgcatgagctgatggcggacatcgacaag
gaaaccgtcgatttccagcccaactacgacgaaaaggaactggagccgacggtcatgccg
acccggttcccgaacctgctggtcaatggttcggccggtatcgcggtgggcatggcgacc
aacattccgccgcacaacctcaccgaatcgatcaatgcctgcatcgcgctgatcgacaat
ccggaaatcgatatcgacggcctgatggagttcatcccgggcccggatttcccgactgcg
ggcatcatcaacggcaccgccggcatcatcgccggttaccgcaccggccgtggccgcgtg
cgcatccgtgccaaggcggatgtcgaagtggccgacaacggccgcgaatcgatcatcgtc
actgaaattccttaccaggtgaacaaggcgcgtctgatcgagaagatcgccgagctggtc
aaggaaaagaagatcgaaggcatcagcgagctgcgcgatgagtccgacaaggacggcatg
cgcatctacatcgaaatcaagcgcggcgagtcggccgaggttgtgctcaacaacctctac
cagcagacccagatggagtcggtgttcggcatcaacatggtggcgctggtcgacggccgc
ccgcagttgatgaacctcaagcagatgctggaggccttcgtccgccaccgtcgcgaagtg
gttacccgccgcaccgtgttcgagctgcgcaaggcgcgcgcccgtgcccacgtgctggaa
ggcctgaccgttgcgctggccaacatcgacgagatgatcgaactgatcaagacctcgccg
aaccccgccgaggcacgcgagcgcatgcttgcgcgcctgtgggaaccgggcctggtcggt
tcgatgctcggcgccgccggtgccgaagcctcgcgtcccgatgacctgcccaagggcgtg
ggcctgatcgaaggcggctaccagctgaccgagatccaggcgacgcagatcctggaaatg
cgcctgcatcgcctgaccgggctggagcaggaccgcttgaccgaggaatacaagcagctg
ctggaagtgatcgccgggctcatccatatcctggaagatcccgatcgcctgctgcaggtg
attcgcgaagagctgatcaacgtgcgcgcagagttcggcgacgagcgccgtaccgagatc
cgccacagcgaagaagacctggacatcctcgacctgatcgccccggaagacgtggtggtc
accctgtcgcatgccggttacgtgaagcgccagccggtcagcgcctatcgcgcccagcgt
cgaggcggccgtggccgcagcgcggcgtcgaccaaggaagaggatttcatcgagcagctg
tggctggtcaacacgcacgacacgctgctgaccttcaccagttcgggcaaggtgttctgg
ctgccggtgtaccagctgcctgaagccggttccaatgcccgcggtcgtccgatcatcaac
tggatcccgctggagccgggcgaacgcgtgcaggccgtgctgccggtgcgcgagtacgcc
gatggccagttcgtgttcttcgccaccaagaacggtacggtcaagaagaccccgctgggc
gagttcgccttccgtctggcccgcggcaagatcgcgatcaacctcgacgagggcgatgcc
ctggtcggcgtcggcctgaccgatggcgagcgcgacatcctgctgttcgcctccaacggc
aagaccgtgcgcttcggtgaagacaaggtccgctcgatgggtcgtaccgctaccggcgtg
cgcggcatcaggatgccggccggcgaggaagtggtcagcctgatcgtggccgagagtgct
ggcggcatcgaggacgagaacgaggacgacaacggtgtcgaggaggccgtcgccaatggc
gatgcgctgatcgaaggtgccgacgacgccaacctgcgttacatcctcaccgccaccgaa
aacggctacggcaagcgcaccccgctgccggactacccgcgcaagggtcgtggcacgcag
ggcgtcatcggcatccagaccaccgagcgcaatggcaagctggttgccgcggtgctgatg
ggtaccgacgatgaggtcctgctgatctccgacggcggcaccctggtgcgtacccgtggc
tcggaaatcagccgagtcggccgcaacacccagggcgtgaccctgatccgcctgtccaag
gacgagaagctgcaggcggtggagcgcatggatgcctcgatcgacgaggacgaggacgag
gtggccgccgccgccccggccacgaccgacggcgcaccggctgctgccagcagcgaggac
gccgcgcaggagtga
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