Stenotrophomonas indicatrix: DAIF1_29210
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Entry
DAIF1_29210 CDS
T07128
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinc03016
]
DAIF1_29210 (truB)
Enzymes [BR:
sinc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DAIF1_29210 (truB)
Transfer RNA biogenesis [BR:
sinc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAIF1_29210 (truB)
Prokaryotic type
DAIF1_29210 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QBR45341
LinkDB
All DBs
Position
complement(3184550..3185458)
Genome browser
AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKPTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLERPVPVISAEALQAAIAPLLGDILQ
RAPIYSALKQGGEPLYVKARRGDAIEAPERQVKVHAIEILEQHPERLRLRVTCGSGTYIR
SLARDLGETLGCGAHISALRRLWVEPFHEPAMVTLEQLRALVEAQDEAAMDALLLPLAAG
LSEYPRVDLDAEQTQRFCVGQRQRDLSWPRGLVAVFGPGSVVQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagccgaccggc
atgagctccaacgccgcgctgcaggtcgcccgtcgcctgttccgtgcggagaagggtggc
cacaccggcagccttgacccgttggccactggcctgttgccgctgtgcttcggcgaggcc
accaagatcgccggcctgctgctgggctcggccaaggcctacgacgccgagatcgtgctg
ggccagaccaccgataccgacgacgccgagggccaggtgctgctcgagcggccggtgccc
gtgatcagcgccgaggccctgcaggcggcgatcgcgccgctgcttggcgacatcctgcag
cgtgcgccgatctattccgcgctcaagcagggcggggagccgctgtatgtgaaggcccgt
cgtggcgacgccatcgaggcgcccgagcgccaggtcaaggtccacgccatcgagattctg
gagcagcaccccgagcggctgcggctgcgggtcacctgcggctcgggcacctatatccgc
agtctggcccgtgacctgggtgaaacgctgggctgtggcgcgcacatcagcgccctgcgg
cgcctgtgggtggaaccgttccacgaaccggcgatggtcaccctggagcagctgagggct
ctggtggaagcgcaggatgaggccgccatggacgcgctgctgctgccgctggcggcgggc
ctgtccgaatacccccgggttgacctggacgccgagcagacccagcgcttctgcgtgggc
cagcgccagcgcgacctctcctggccgcgcggcctggtggcggtgtttggccctggatcg
gtggtgcagggcctgggccaggtcgacgacagcggtctgctggccccgcagcgccgcttc
aacctctga
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integrated database retrieval system
