Stenotrophomonas indicatrix: DAIF1_29240
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Entry
DAIF1_29240 CDS
T07128
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinc03021
]
DAIF1_29240 (nusA)
03009 Ribosome biogenesis [BR:
sinc03009
]
DAIF1_29240 (nusA)
Transcription machinery [BR:
sinc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DAIF1_29240 (nusA)
Ribosome biogenesis [BR:
sinc03009
]
Prokaryotic type
rRNA transcription factors
DAIF1_29240 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QBR45344
LinkDB
All DBs
Position
complement(3188769..3190280)
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AA seq
503 aa
AA seq
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MSKELLLVVDAVANEKGVPREVIFDAIEAALASAAKKRYPDEEVLTRVVIDHKDGNYETF
RRWEVVADDVVMESPDRQIRLMDAIDEAEGVDVGDYIEEQIENPDFGRIAAQAAKQVIVQ
RVREAERQQVVDAWADRVGELITGVVKRAERGNIYVDLGGNAEGFIPKDKGIPRDVLRAG
DRVRGYLAEVRSEPRGPQLFISRAAPEFMIELFKLEVPEVGQGLVEIKACARDPGDRAKI
AVLAHDARTDPIGACIGMRGSRVQAVSNELNGERVDIVLWNENPANFVINAMAPAEVQSI
IVDEDKHSMDLAVAEDRLAQAIGKGGQNVRLASRLTGWQLNVMTQDQVTAKSEAEQASAR
QLFMDKLEVDEEIAGILVSEGFGTVEEIAYVPVGELLAVEGFDEDIVEELRARARDALLN
EALAVEEGLEDGQPAQDLLSLKGMDEATAYALAGHGVRTSEDLSDLAADEVMDFGIEGLD
QERAAALILAARAEEIARLERGE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaactgttgctggtagtggacgcggtcgccaatgagaagggcgtgccgcgt
gaagtgatcttcgatgccatcgaggccgccctggcctcggcagcgaagaagcgctatccc
gacgaggaagtgctgacccgcgtggtcatcgaccacaaggatggcaactacgaaaccttc
cgccgctgggaagtggtggccgacgacgtagtgatggaatcgccggatcgccagatccgc
ctgatggacgccatcgacgaagccgaaggcgtggatgtcggcgattacatcgaagagcag
atcgagaaccccgacttcggtcgcatcgccgcccaggccgccaagcaggtgatcgtgcag
cgtgtgcgcgaagccgagcgccagcaggtggtcgatgcctgggccgatcgcgtcggtgag
ctgatcaccggtgtggtcaagcgcgccgagcgcggcaacatctatgtcgacctgggcggc
aacgccgaaggcttcattccgaaggacaagggcattccgcgtgatgtcctgcgtgccggc
gaccgcgtccgcggctacctggccgaagtgcgttcggagccgcgtggcccgcagctgttc
atcagccgcgcagcgccggaattcatgatcgagctgttcaagctggaagtaccggaagtc
ggccagggcctggtggaaatcaaggcgtgcgcccgcgatccgggcgaccgcgccaagatc
gccgtgctcgcccacgatgcccgcaccgatccgatcggcgcctgcatcggcatgcgtggt
tcgcgcgtgcaggccgtgtccaacgagctcaatggcgagcgcgtggacatcgtcctgtgg
aacgagaacccggccaacttcgtcatcaacgcgatggcgccggccgaagtgcagtcgatc
atcgtcgatgaagacaagcattcgatggacctggccgttgctgaagaccgcctggcccag
gcgatcggcaagggcggccagaacgtgcgcctggccagccgcctgaccggttggcagctg
aacgtgatgacccaggaccaggtgaccgccaagtcggaagccgagcaggcttcggctcgc
cagctgttcatggacaagctggaagtggacgaggaaatcgctggcatcctggtcagcgaa
ggcttcggcacggtcgaggaaatcgcatatgtaccggtcggcgaactgctggccgtggaa
ggtttcgacgaagacatcgtcgaagagctgcgcgcacgtgcccgcgatgcgctgctcaat
gaggccctggcagtcgaggaaggcctggaggacggccagccggcgcaggacctgctgtcc
ctgaagggcatggacgaagccaccgcatatgcgttggccggccacggcgtgcgtaccagc
gaggacttgtccgacctggccgccgacgaggtcatggacttcggcatcgaagggctggac
caggagcgcgccgcggcgctgatcctggccgcgcgtgccgaggaaatcgcccgactggaa
cgcggcgaatga
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