Stenotrophomonas indicatrix: DAIF1_31050
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Entry
DAIF1_31050 CDS
T07128
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00071
Fatty acid degradation
sinc00280
Valine, leucine and isoleucine degradation
sinc00310
Lysine degradation
sinc00362
Benzoate degradation
sinc00380
Tryptophan metabolism
sinc00410
beta-Alanine metabolism
sinc00640
Propanoate metabolism
sinc00650
Butanoate metabolism
sinc00907
Pinene, camphor and geraniol degradation
sinc00930
Caprolactam degradation
sinc01100
Metabolic pathways
sinc01110
Biosynthesis of secondary metabolites
sinc01120
Microbial metabolism in diverse environments
sinc01200
Carbon metabolism
sinc01212
Fatty acid metabolism
Module
sinc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DAIF1_31050 (fadJ)
00650 Butanoate metabolism
DAIF1_31050 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
DAIF1_31050 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DAIF1_31050 (fadJ)
00310 Lysine degradation
DAIF1_31050 (fadJ)
00380 Tryptophan metabolism
DAIF1_31050 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DAIF1_31050 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DAIF1_31050 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DAIF1_31050 (fadJ)
00930 Caprolactam degradation
DAIF1_31050 (fadJ)
Enzymes [BR:
sinc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DAIF1_31050 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DAIF1_31050 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DAIF1_31050 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
MORN
ApbA
AlaDh_PNT_C
UDPG_MGDP_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
QBR45521
LinkDB
All DBs
Position
3394423..3396486
Genome browser
AA seq
687 aa
AA seq
DB search
MLSSFDGLRFSHWHPEIRDDGVVVLSLDRQDSSVNAMSQDVLLELGDLLERIAMDPPKGV
VIQSLKKAGFIAGADLKEFQEFDRRGTVNDAIRRGQSTYQKLAELPCPTVAAIHGHCLGG
GTELALACRYRVASNDSSTRIGLPETQLGIFPGWGGSARLPQLVGAPAAMDMMLTGRTLS
ASAARGIGLVDKVVAPAVVLDTAVALALSGTTRPFKQRALAWATNTWPARQLLAPQMVKQ
VARKAKKDQYPAPYALISTWQRSGGKPVQARLDAERRAVVKLASTPTARNLIRIFFLTER
LKGLGGGDSGIRHVHVVGAGVMGGDIAAWAAYKGFEVTLQDREQRFIDPAMERAQALFAK
KVRDESKRPAVAARLRADLEGNGVAQADLVIEAIIENPEAKRALYQTLEPKMKLDALLTT
NTSSIPLVELRDHIQRPAQFAGLHYFNPVAQMPLVEIIHHDGMAAETERRLAAFCKALGK
FPVPVAGTPGFLVNRVLFPYMLEAATAYAEGIPGPVIDKAAVKFGMPMGPIELIDTVGLD
VAAGVGKELAPFLGLQIPAALQTVEPDKRGKKDGQGIYTWENGRAKKPDVARDYQAPADL
EDRLILPLLNEAVACLHEGVVADADLLDAGVIFGTGFAPFRGGPIQHIRAVGADAIVERL
KALQQRHGDRFAPRPGWDNPVLREPVV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaagcttcgatggtctccgcttcagccactggcaccccgagatccgcgacgat
ggcgtggtggtcctctccctggatcgtcaggacagcagtgtcaacgcaatgtcgcaggat
gtgctgctggagctgggcgacctgctggagcgcatcgccatggacccaccgaagggcgtg
gtgatccagtccctcaagaaggcaggcttcatcgccggtgccgacctgaaggagttccag
gagttcgatcgccgcggcaccgtcaacgacgccatccgccgcggccagtcgacctaccag
aagctggcagaactgccctgcccgaccgtggccgccatccatggccattgcctgggcggc
ggtaccgagctggccctggcctgccgttatcgcgttgcatccaatgacagttccacccgc
atcggcctgccggaaacccaattgggcatcttcccgggctggggtggcagcgcgcgcctg
ccgcagctggtcggcgcaccggcggcgatggacatgatgctgaccggacgcacgctgtcg
gcctcggccgcacgcggcatcgggctggttgacaaggtggtggcaccggccgtcgtgctc
gataccgccgtggcgctggcactgtccggcaccacccgcccgttcaagcagcgtgcgctg
gcctgggcgaccaatacctggccggcacgccagctgctggccccgcagatggtcaagcag
gtcgcacgcaaggcgaagaaggaccagtacccggcgccgtatgcgttgatcagcacctgg
cagcgcagcggcggcaagccggtgcaggcacgcctggatgccgaacgacgcgccgtagtg
aagctggccagcacgccgaccgcgcgcaacctgatccgcatcttcttcctcaccgaacgc
ctgaagggcctgggcggtggcgattccggcatccgccacgtgcacgtggtcggtgctggc
gtgatgggcggtgacattgctgcgtgggccgcctacaagggttttgaagtgaccctgcag
gaccgcgagcagcgcttcatcgacccggccatggaacgtgcacaggcactgttcgccaag
aaggtgcgtgacgagagcaagcgcccggccgtcgccgcgcgcctgcgtgcggacctggaa
ggcaatggcgtggcgcaggccgatctggtcattgaagcgatcatcgagaacccggaagcc
aagcgtgcgctgtaccagacgctggagccgaagatgaagctcgacgcgttgctgaccacc
aacacttcgtcgattccgctggtggagctgcgcgatcacatccagcgcccggcgcagttc
gccggcctgcattacttcaacccggtggcacagatgccgttggtggagatcatccatcac
gacggcatggcggccgaaaccgagcgtcgcctggcagccttctgcaaggcgctgggcaag
ttcccggtgccggtggccggcacgcccggtttcctggtcaaccgcgtgctgttcccgtac
atgctggaagcggccaccgcatacgctgaaggcattccgggcccggtgatcgacaaggcg
gcggtgaagttcggcatgccgatgggcccgatcgaactgatcgacaccgtaggcctggac
gtggccgctggcgtgggcaaggaactggccccgttcctgggcctgcagattccggcggcg
ctgcagacggtggaaccggacaagcgcggcaagaaggatggccagggcatctacacctgg
gagaacggccgggccaagaagccggacgtggcgcgcgactatcaggcgcctgccgatctg
gaagatcgcctgatcctgccgttgttgaacgaggcggtggcctgcctgcacgaaggcgtg
gtggccgacgcggacctgctggatgcgggcgtgatcttcggtaccggtttcgcaccgttc
cgcggcggtccgatccagcacatccgtgcggtgggtgccgatgccatcgtggagcgcctg
aaggcgctgcagcagcgtcacggtgatcgcttcgcaccgcgcccgggctgggacaacccg
gtactgcgcgaaccggtggtttga
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