Stenotrophomonas indicatrix: DAIF1_32030
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Entry
DAIF1_32030 CDS
T07128
Name
(GenBank) alginate lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DAIF1_32030
Enzymes [BR:
sinc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
DAIF1_32030
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Paralog
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
QBR45619
LinkDB
All DBs
Position
3517896..3520145
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AA seq
749 aa
AA seq
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MRLQPLSLCSHRLALALALAAPFTLLPTAPLHAAPAAAARQGDTAPVLVTAAQWQQMASE
GSRYPWFAKEQARTQKSLQKMMKAGIDVPVPKDKGGGRTHEQHKRNYQALLAAGTLYRLT
GDKAYVAYSRDMLLQYAKLYPTLGPHPEGRGQIPGRVFWQVLNDSVWLVNAIQGYDAIRD
ALSPQDRQTIESQVFRPMAEFLASEPKNYDQIHNHATWAVAATGMTGYVLRDRELVEKSL
RGSRKDDQFGFLRQIDLLFSPDGYYEEGPYYQRYALAPFLLFANAIERNEPQRKIFARRD
GVLLKAVDVLVQTSYDGLFFPINDAILDKGIDTEELVAGIGIAYAQAGDDRLLSVAQQQK
RLLLSPEGLQVAQALAANKAKPFDYRPMLLRDGPDGERGGLAILRMGGERGQALVQKDTM
QGMGHGHFDKLNWLFYDNGNAVVTDYGAARFLNVEAKRGGIYLAENRSWAKQTVAHNTLV
VNEQSHFKGDWKRGEELAPQVRFFQADADTQIASATMRDAYPGVVFTRTQALLRHPELGL
PVVLDLLQVHGDKAARYDLPLHFNGHIVTTGFEAEHFPAQRPVLGSDNGYQHLWLDARSK
AGSEPRTLAWLLDGRFYTYRFGSSAPAQALLVESGANDPEFNLRREPALLQRVEGQKDVT
FFSVLEPHGEYNGTAEYVHGADSRIKQIIRTRGNDAEVLELRLASGARIALGVADDSDAK
GEHSVTVDGHAYRWSGSHARMDRSKGEAR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcagccgctgtccctttgttcccaccgtctggcgctcgccctcgccctggcc
gctcccttcaccctgttgccgacggcaccgctgcatgcggcacctgccgcagccgcgcga
caaggcgataccgcgccggtactggtgaccgccgcgcagtggcagcagatggccagcgaa
ggcagccgctatccgtggttcgccaaggaacaggcgcgtacgcagaaatcgctgcagaag
atgatgaaggccggcatcgacgtgccggtgccgaaggacaagggcggcggtcgcacccat
gagcagcacaagcgcaactaccaggcactgctggccgccggcaccctgtaccggctgacc
ggcgacaaggcctatgtcgcctattcgcgcgacatgctgctgcagtacgccaagctctac
ccgaccctcggcccgcatccggaaggacgcgggcagattcccggccgggtgttctggcag
gtgctcaacgattcggtctggctggtcaacgccatccagggctacgacgcgatccgcgat
gccctgtcgccgcaggatcggcagaccatcgaatcgcaggtgttccggccgatggccgag
ttcctggccagcgagccgaagaactacgaccagatccacaaccacgcgacctgggcggtg
gccgccaccggcatgaccggctacgtgctgcgtgatcgcgaactggtggagaaatcgctg
cgcggcagccgcaaggatgaccagttcggtttcctgcggcagatcgacctgctgttctcg
cccgatgggtattacgaggaaggcccctactaccagcgctatgcgctggcgccgttcctg
ctgtttgccaacgcgatcgaacgcaacgagccgcagcggaagatcttcgcgcgccgcgac
ggcgtgctgctgaaggcggtggacgtgctggtgcagaccagctacgacggcctgttcttc
ccgatcaacgatgcgatcctggacaagggcatcgataccgaagagctggtggctggcatc
ggcatcgcctatgcgcaggccggcgatgaccgtctgctgtcggtcgcccagcagcagaaa
cgcctgctgctgtcgccggaagggctgcaggtggcgcaggcgttggcagccaacaaagcc
aaaccgttcgactaccggccgatgctgctgcgcgacggcccggacggtgaacgcggcggc
ctggcgatcctgcgcatgggcggcgaacgcggccaggcgctggtgcagaaggacaccatg
cagggcatgggccacggccacttcgacaagctcaactggctgttctacgacaatggcaac
gccgtggtgaccgactacggcgcggcgcgcttcctcaacgtggaagccaagcgcggtggc
atctatctggccgagaaccgcagctgggccaagcagaccgtggcccacaacacgctggtg
gtgaacgagcagagccacttcaagggcgactggaagcgcggtgaggaactcgccccgcag
gtgcgcttcttccaagccgacgcagatacccagatcgcctcggcgacgatgcgcgatgcc
tatccgggcgtggtgttcacccgcacccaggcactgctgcgccaccccgaactgggcctg
ccggtggtgctggacctgctgcaggtgcacggcgacaaggctgcacgctacgacctgccg
ctgcacttcaacggccatatcgtcaccaccggtttcgaggccgagcatttccccgcccag
cgcccggtgctcggcagcgacaacggctaccagcacctgtggctggacgcacgcagcaag
gccggcagtgagccgcgcacgctggcgtggctgctcgacggacgcttctacacctaccgc
ttcggcagcagcgcgccggcgcaggcgttgctggtggagagcggtgccaatgatcccgag
ttcaacctgcgccgcgaaccggcgctgctgcagcgcgtggaaggacagaaggatgtgacc
ttcttcagcgttctggagccgcatggcgagtacaacggcaccgccgagtacgtgcacggt
gccgacagccgcatcaagcagatcatccgcacccgcggcaatgatgccgaggtgctcgag
ctgcgcctggccagcggcgcccgcatcgcactcggcgtggccgacgacagcgacgcgaag
ggcgaacacagcgtgacggtggatggccatgcctaccgctggagcggcagccatgcgcgc
atggaccgcagcaagggtgaggcacgatga
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