Stenotrophomonas indicatrix: DAIF1_32260
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Entry
DAIF1_32260 CDS
T07128
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00550
Peptidoglycan biosynthesis
sinc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DAIF1_32260 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sinc01003
]
DAIF1_32260 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sinc01011
]
DAIF1_32260 (mrcB)
Enzymes [BR:
sinc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DAIF1_32260 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DAIF1_32260 (mrcB)
Glycosyltransferases [BR:
sinc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DAIF1_32260 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sinc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DAIF1_32260 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QBR45642
LinkDB
All DBs
Position
complement(3547121..3549562)
Genome browser
AA seq
813 aa
AA seq
DB search
MPRRYDSDDIDDFDDDDQQDAGPLWRRRLITWTMAAVALGLGFLIPYTLYLNQQVTQRFG
ELRWQIPTRVYARPLVLMPGKAMDAATLKTELAASAYRDDGQGKDPATYAVQGGRFVISS
RGYNDVDGHVAARRVELSLSGGSIASLRDADSRKALKAARMDPARIATLYGQKQEERRLI
RMNEAPDLLVTGLQAVEDKDFNRHHGIDLSGIARAVWVTVRSGGQSRQGASTLTQQLARS
GLLGIGKEQTVTRKFNEVLYALIMEARYDKRTIFEAYLNQVYLGQRGSQAIHGMSSGAEF
WFGRDLSSLETEQIALLIGLVKGPSYYDPRRNPERALDRRNFVLGKLHEATLIDDAEYQR
ALKAPLGVPKTPGLVAANRFPAYVDLVRRQLAHDYPESALQGAGLSVMSGMSPSAQAYAE
GAVTRTIKSLESKRRPELQAGLVMTDVHNGDVVAVIGSREVSEVGFNRAIEAQRPVGSLL
KPFVYLLALAQPDRYSLASWVDDSPVTVQLSRGRNWNPGNADNRSHGTVRLIDALAHSYN
QATVRVGMQVGPERVTQLIHVLAGIKAEANPAVILGSTDQSPYAMAQLYQFLASGGEIQP
LHAVRGVLDPQGKLLKRYDKTPAPAQEGDSIAANLISIGLQQVVASGTAQRLNADGLGRL
QPAGKTGTTNDGRDSWYAGYTGDHLAVIWMGNDQNEQAGLYGATGAMRVWSGIFQRLPTA
PLKVSNKGLDWQPVAATGTNSTDEGCPGARRFPFVVGYAPAYEPCAPAALPDAQGGAEGE
GGGWRSWFGLDRKPEPAAEPAAAPAAATPPPSR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgctacgattcagacgatatcgacgatttcgacgacgacgaccagcaggac
gccggtccgctctggcgccgccgactgatcacctggaccatggcggcggtcgcgttggga
ttgggtttcctaatcccctatacgctgtacctgaaccagcaggtgacgcaacgcttcggt
gaactgcgctggcagatcccgacgcgcgtctatgcacgcccgctggtgctgatgcccggc
aaggcgatggatgcggccaccctgaagaccgaactggccgcctcggcctatcgcgatgat
ggccagggcaaggatccggcaacctatgcggtgcagggcgggcgcttcgtcatctccagc
cgcggctacaacgatgtcgatggccacgttgctgcgcgccgggtcgagctgtcgctgtcc
ggcggcagcatcgcctcgctgcgcgacgccgacagccgcaaggcgctgaaggcagcccgc
atggatcctgcgcgcattgccacgctgtatgggcagaagcaggaagaacgccgcctgatc
cgcatgaatgaggcgccggacctgttggtcactggcctgcaggcggtcgaggacaaggac
ttcaaccgccatcacggcattgatctgtccggcatcgcgcgcgcggtctgggtgactgtc
cgctccggtgggcagagccgccagggcgcttccaccctgacccagcagctggcccgcagc
ggcctgctgggaatcggcaaggaacagaccgtcacccgcaagttcaacgaagtgctgtat
gcgttgatcatggaagcgcgctatgacaagcgcaccatcttcgaggcgtacctcaaccag
gtgtatctgggccagcgcggcagccaggcgatccacggcatgtcctccggtgccgagttc
tggttcggccgcgatctctcctcgctggaaaccgagcagatcgcgctgctgatcggcctg
gtcaaggggccgtcctactacgacccgcggcgcaatcccgagcgcgcgctggaccgtcgc
aacttcgtgctgggcaaactgcacgaggcgaccctgatcgacgatgccgagtaccagcgt
gcgttgaaggcgccgctgggcgtgcccaagaccccgggtctggtggcagccaaccgcttc
ccggcctacgttgacttggtgcgtcgccagcttgcccacgactatccggaatccgccctg
cagggcgctggcctgagcgtgatgagcggcatgtcgccgtccgcgcaggcttatgccgaa
ggtgcggtcacgcgcaccatcaagtcgctggaaagcaagcgtcgccccgagctgcaggcc
ggcctggtgatgaccgacgtgcacaacggtgacgtggtggcggtgatcggcagccgcgaa
gtgtccgaggtcggcttcaaccgtgccatcgaggcgcagcgcccggtcggctcgctgctc
aagccattcgtgtacctgctggcactggcgcagccggaccgctattcgctggccagttgg
gtcgatgattcaccggtgacggtgcagctcagccgcggccgcaactggaaccccggcaat
gcggacaatcgcagccacggcaccgtgcgcctgatcgatgcgctcgcccactcctacaac
caggcgacggtacgggtgggcatgcaggtcggcccggaacgggtgacgcagctgatccac
gtgctggccggcatcaaggccgaggcgaacccggcggtgatcctcggctcgaccgaccag
agcccgtacgcgatggcgcagctgtaccagttcctggcatcgggcggcgagatccagccg
ctgcacgcggtgcgtggcgtccttgatccgcagggcaagctgctcaagcgctacgacaag
accccggcaccggcacaggaaggtgactcgattgccgccaacctgatcagcatcggcctg
cagcaggtggtggccagtggtaccgcgcagcgtttgaacgccgatggcctgggccgcctg
cagcctgccggcaagaccggcaccaccaacgatggccgcgacagctggtatgccggttac
accggcgatcacctggcggtgatctggatgggcaatgaccagaacgaacaggccggcctg
tatggcgccaccggcgcgatgcgggtgtggtcgggcatcttccagcgcctgccgacggcg
ccgttgaaggtcagcaacaagggcctcgactggcagcctgttgccgccacgggaaccaac
agcaccgatgaagggtgcccgggtgcccgccgcttcccgttcgtggtgggctatgcgcct
gcgtatgaaccgtgcgcaccggcggccttgccggacgcgcagggcggtgcggaaggcgag
ggcggcggctggcgcagctggttcggccttgaccgtaagcccgaacccgccgctgaacct
gccgcagcacccgctgcagcgactcctcctccaagccgatga
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