Stenotrophomonas indicatrix: DAIF1_32610
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Entry
DAIF1_32610 CDS
T07128
Symbol
ruvB_2
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAIF1_32610 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_32610 (ruvB_2)
Enzymes [BR:
sinc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAIF1_32610 (ruvB_2)
DNA repair and recombination proteins [BR:
sinc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAIF1_32610 (ruvB_2)
RecFOR pathway proteins
DAIF1_32610 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_33
AAA_16
AAA_22
AAA_14
TIP49
nSTAND3
AAA_2
NTPase_1
RNA_helicase
AAA_18
TsaE
Bac_DnaA
Rad17
NB-ARC
AAA_17
AAA_24
AAA_28
ABC_tran
DUF87
Sigma54_activ_2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QBR45676
LinkDB
All DBs
Position
complement(3583678..3584718)
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AA seq
346 aa
AA seq
DB search
MTDDRIIAAGATREDDAADASIRPKRLADYLGQVPVREQMEIYIQAAKGRGDALDHVLIF
GPPGLGKTTLSHVIANELGVALRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPV
VEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSVEELTRIVRRSAAILAIDCTADGAGEIARRARGTPRIANRLLRRVRDYAQVKAGGH
IDQTVAQAAMQMLKVDPEGFDELDRRLLKTMVDYFDGGPVGIESLAAALSEERGTLEDVV
EPYLIQQGFLVRTARGRMATHKAYRHMGLKPKNPPQDLFAEVPDVG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaccgcatcatcgccgccggcgccacccgcgaggatgacgccgccgacgcc
agcatccgacccaagcgacttgccgactatctcggccaggtgccggtgcgcgagcagatg
gagatctacatccaggccgccaaggggcgtggcgacgcgctggaccacgtcctgatcttc
ggcccccccggcctgggcaagaccaccctcagccacgtcatcgccaatgaactgggcgtg
gccctgcgcgtgacctccggcccggtgatcgagaaggccggcgatctggccgcgctgctg
accaacctgcagccgcacgatgtgctgttcatcgacgagatccatcgcctgtcgccggtg
gtggaagaagtgctgtatccggcgatggaagatttccagatcgacatcatgatcggcgag
ggccctgcggcgcgctcgatcaagatcgacctgccgccgttcaccctgatcggcgccacc
acccgcgccggcctgctgaccgcgccgctgcgcgaccgcttcggcatcgtccagcgcctg
gagttctacagcgtcgaagaactgacccgcatcgtgcgccgctcggccgcgatcctggcc
atcgactgcaccgccgacggggcaggggagatcgcgcgccgcgcgcgtggcaccccgcgt
atcgccaaccgcctgctgcgccgcgtgcgcgattacgcccaggtcaaggccggtggccac
atcgaccagaccgtggcccaggccgcaatgcagatgctcaaggtcgacccggaaggcttc
gacgagcttgaccgccggctgctgaagaccatggtcgattacttcgacggtggcccggtg
ggcatcgagtcgctcgccgcggcgctgtccgaagagcgtggcacgctggaagacgtggtc
gagccgtacctgatccagcagggcttcctggtgcgcaccgcgcgtggccgcatggcgacc
cacaaggcctaccggcacatgggcctgaagccgaagaacccgccacaggacctgtttgcc
gaggtccccgatgtcggttga
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