Stenotrophomonas indicatrix: DAIF1_32830
Help
Entry
DAIF1_32830 CDS
T07128
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sinc03110
]
DAIF1_32830 (clpB)
Chaperones and folding catalysts [BR:
sinc03110
]
Heat shock proteins
HSP100
DAIF1_32830 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_7
TniB
bpMoxR
AAA_14
IstB_IS21
DUF815
AAA_18
NBD_SMAX1
AAA_24
AAA_19
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QBR45698
LinkDB
All DBs
Position
complement(3610898..3613483)
Genome browser
AA seq
861 aa
AA seq
DB search
MRMDKLTSRFQQALADAQSLAVGRDNSIIEPVHVFSALLDQQGGSTRPLLAQAGVNVPVL
RERLDEALEALPKVSGQAGNLSIGNDLNRLLNHTDKLAQQNGDAFIASEWFVLAALEDGG
TLGMAMRAAGADKARLQTAIDKLRGGENVQSENAEEQRQALEKYTIDLTARAESGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSL
DMGALIAGAKFRGEFEERLKGVLNDLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYAVH
HGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRLI
QLKIQREMLKKEKDDASRQRLADLENDIDALEREFSDLNEVWKSEKAALQGTTKIKEQVE
QAKVELESAQRRQDFARMSEIQYGVLPQLEKQLAAAQEVENHDFKLVQDRVTDEEIAEVV
SRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPGGS
FLFLGPTGVGKTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL
GSHQIQDMSGDDTPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARI
QMRGLEKRLAERGLKLVVSDAAFDLLGNVGFDPVYGARPLKRAIQAQLENPLAQKILSGA
FVNGDTIEVGNDGGHLVFAKA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcggatggacaagctcacctcgcgtttccagcaggcgctggcagacgcgcagtcgctg
gcggtaggccgcgacaacagcatcatcgaaccggtgcacgtgttcagtgccctgctggac
cagcaggggggcagcacccggccgctgctggcccaggccggcgtcaacgtgccggtgttg
cgcgaacgcctggacgaggcgcttgaagcgctgccgaaggtgtccggccaggccggcaac
ctgtcgatcggcaacgacctcaaccgcctgctcaaccacaccgacaagctggcccagcag
aacggtgatgccttcatcgccagcgagtggttcgtgctggccgcgctggaagacggcggc
acgctgggcatggcgatgcgcgctgccggtgccgacaaggcgcgcctgcagaccgccatc
gacaagctgcgtggcggcgagaacgtgcagtcggagaacgccgaagagcagcggcaggcg
ctggagaaatacaccatcgacctgaccgcacgcgccgagagcggcaagctcgacccggtg
atcggtcgcgacgaagaaatccgccgcaccatccaggtgctgcagcgtcgtaccaagaac
aatccggtgctgatcggcgaacccggcgtgggcaagaccgcgatcgtcgaaggcctggcc
cagcgcatcatcaatgacgaagtgcctgaaggcctgcgcggcaagcgcgtgctgtcgctg
gacatgggcgcgctgatcgccggcgcgaagttccgcggtgaattcgaagaacgcctgaag
ggcgtgctcaacgacctggccaagagtgaagggcagatcatcctgttcatcgacgagctg
cacaccatggttggcgcgggcaaggccgacggtgcgatggatgccggcaacatgctcaag
ccggcactcgcgcgcggtgaactgcactgcgtcggtgcgaccacgctggacgagtaccgc
aagtacatcgagaaggatgccgcgctggagcgccgcttccagaaagtcttcgtgggcgag
ccgacggtggaggacaccatcgcgatcctgcgcggcctgaaggaaaagtacgcggtgcac
cacggggtggagatcaccgacccggccatcgtcgctgcggccaccctgtccaaccgctac
atcaccgaccgccagctgccggacaaggccatcgacctgatggacgaggccgcttcacgg
ctgcgcatggagatcgattccaagccggaggaactggaccggctggaacgtcgcctgatc
cagctgaagatccagcgcgagatgctgaagaaggaaaaggacgacgcttcgcggcagcgc
ctggccgatctggaaaacgatatcgatgcgctggagcgcgagttctccgatctcaacgaa
gtctggaaatcggagaaggccgcgctgcagggcacgaccaagatcaaggaacaggtcgag
caggccaaggttgaactggagtcggcccagcgccggcaggatttcgcgcgcatgagcgag
atccagtatggcgtgctgccgcagctggaaaagcagctggctgccgcccaggaagtggag
aaccacgacttcaagctggtgcaggaccgtgtcaccgacgaggagatcgccgaggtcgtc
tcgcgctggaccggcatcccggtcaacaagatgctcgaaggcgagcgtgacaagctgctg
cgcatggaagaggtgctgcacaaccgcgtggtcggccaggaagaggcgatcaaggtggtg
tccgacgcggtgcgtcgttcgcgcgctggcttgtccgatccgaatcgaccggggggatcg
ttcctgttcctgggcccgaccggcgtgggcaagaccgaactgtgcaagtcgctggccgag
ttcctgttcgacagcgccgacgcgatgatccgcatcgacatgagcgagttcatggagaag
cacagcgtcgcacgcctgatcggtgcgccccccggctacgtgggctatgaggaaggcggt
tacctcaccgaggctgtgcgccgtcgcccgtattcgctgatcctgctggacgaggtggaa
aaggcgcatccggatgtgttcaacatcctgctgcaggtactggacgacggtcgcctgacc
gatggccagggccgcacggtggacttccgcaataccgtcatcgtgatgacctccaacctg
ggttcgcaccagatccaggacatgagcggcgatgacacgccggaggcctacacgcagatg
aaggcggcggtgatgggcgtggtgcaggcgcacttccgtccggagttcatcaaccggttg
gatgacatcgtggtgttccatccgctggacaagcagcagatcaagcagatcgcgcgcatc
cagatgcgtggcctggaaaagcgcctggccgagcgtggcctgaagctggtggtgtccgat
gcagcgttcgatctgctcggcaacgtcggcttcgatccggtctacggcgcgcgtccgctg
aagcgtgcgatccaggcacagctggaaaacccgctggcgcaaaagatcctgtccggtgcg
ttcgtcaacggcgataccatcgaagtgggcaacgacggcggccatctggtgttcgccaag
gcctga
DBGET
integrated database retrieval system
