Stenotrophomonas indicatrix: DAIF1_33030
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Entry
DAIF1_33030 CDS
T07128
Symbol
atoC_1
Name
(GenBank) regulatory protein AtoC
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DAIF1_33030 (atoC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sinc02022
]
DAIF1_33030 (atoC_1)
02035 Bacterial motility proteins [BR:
sinc02035
]
DAIF1_33030 (atoC_1)
Two-component system [BR:
sinc02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DAIF1_33030 (atoC_1)
Bacterial motility proteins [BR:
sinc02035
]
Pilus system
Twitching motility proteins
DAIF1_33030 (atoC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_19
HTH_50
Pre_tape_measure
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QBR45718
LinkDB
All DBs
Position
3638392..3639765
Genome browser
AA seq
457 aa
AA seq
DB search
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDITVLRGLVKHAL
ELNNSERPVAGPAAEQAARLLGESPAMDVLRATIGKVARSQAPVYILGESGVGKELVART
IHAQGARAAGPFVPVNCGAIPTELMESEFFGHRKGSFTGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAPSEEPVDVRILSATHKDLAELVEDGRFRHDLYYR
INVIELRVPPLRERRQDLPALAASILARLARSHGRATPLLAPSALDALAQYGFPGNVREL
ENILERALALAEEDRIGADDLRLPQHAPRSPGSAAHAEAVVDLHPGSAALPSYIEQLERS
AIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgcagcgccctcgtcgtcgacgatgaacgcgatatccgcgaactgctg
gtgttgaccctcggccgcatgggcctgcgcatcagcaccgccgccaacctcgccgaagcc
cgcgaactgctggccagcaatccctatgacctgtgcatcaccgacatgcgtctgcccgat
ggcaatggcatcgaactggtcagcgagatcgcccagcactatccgcgcacgccggtggcg
atgatcaccgcctttggcagcatggacctggccgtggaggcgctgaaagccggtgccttc
gatttcgtcagcaagccggtggacatcaccgtgctccgcggcctggtcaagcatgcgctg
gaactcaacaacagcgaacgccccgttgccggccccgccgccgaacaggccgcacgcctg
ctcggcgaatcgccggcaatggacgtgctgcgcgccaccatcggcaaggttgcgcgcagc
caggcgccggtctacatcctgggcgaatccggggtgggcaaggaactggttgcacgcacc
atccatgcacagggtgcacgcgccgctgggccgttcgtgccggtcaactgtggcgccatt
cccaccgagttgatggagagtgagttcttcggccatcgcaagggcagcttcactggcgcc
catgccgacaagccgggactgttccaggccgcacacggcggcaccctgttcctggatgag
gtggccgagctgccgctgcagatgcaggtgaagctgctgcgtgcgatccaggaaaaatcg
gtgcgtgcggtgggcgcccccagcgaagagccggtggacgtgcgcatcctctcggccacc
cacaaggatctggccgagctggtcgaagacgggcgcttccgccacgacctctactaccgc
atcaatgtgatcgaactgcgcgtgccgccgctgcgcgagcgtcgccaggacctgcccgca
ctggcggcgtcgatcctggcgcggctggcccgcagccacggccgcgccaccccgctgctg
gcgccgtcggcgctggacgcgttggcccagtacggcttccccggcaacgtgcgcgagctg
gagaacatcctggaacgcgcgctggcactggccgaggaagaccgtatcggcgccgacgac
ctgcgcctgccgcagcatgcccctcgctcaccgggcagcgctgcgcacgctgaagccgta
gtcgatctgcacccgggcagtgccgccctgccctcgtatatcgaacagctcgagcgcagt
gccatccagcgcgcgctggaagaaaaccgctggaacaagacccgcactgccgcgcagctg
ggcatcaccttccgtgcgctgcgctacaagctgaagaagctggggatggaataa
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