Stenotrophomonas indicatrix: DAIF1_34430
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Entry
DAIF1_34430 CDS
T07128
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00730
Thiamine metabolism
sinc01100
Metabolic pathways
sinc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DAIF1_34430 (thiC)
Enzymes [BR:
sinc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DAIF1_34430 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QBR45856
LinkDB
All DBs
Position
complement(3797548..3799392)
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AA seq
614 aa
AA seq
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MNAQLSALQQQAQQLSESVTRPIPGSRKIHVPGSRPDLQVPMREIALTRTPTVFGGEENA
PVTVYDTSGPYTDPDVRIDLSAGLPALRRGWVEERNDTEQLDGLSSSFGRAREHDPKLDP
VRFPARSLPRRARAGANVTQMHYARRGIITPEMEFVAIRENQRLEAIRDAALLQQHPGEA
FGASIQQIITPEFVREEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVAIGTVPIYQALEKVDGRAEA
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTARRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICEIMKAYDVTFSLGDGLRPGCIADANDAAQFGELETLGELTKIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYRIAAHAADLAKGHPGAQVRDNALSKARFEFRW
EDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVREYAEKGMQEKS
EQFRAAGAEVYQQG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacagctctccgccctgcagcaacaggcccagcaactctccgaatccgtgacc
cggccgatacccggctcgcgcaagatccacgtgcctggctcgcgcccggacctgcaggtg
ccgatgcgcgagatcgcgctgacccgcacgccgaccgtgttcggcggcgaagagaacgca
ccggtcaccgtctacgacacttccggcccgtacaccgatccggacgtgcgcatcgacctg
tctgcgggcctgccggcactgcgccgtggctgggtggaggagcgcaacgacaccgaacag
ctcgacggcctcagctcctcgttcggccgcgcgcgcgagcatgatccgaagctggacccg
gtgcgttttcccgcgcgcagcctgccacgtcgcgcgcgggccggcgccaacgtcacccag
atgcactatgcgcgccgcggcatcatcaccccggaaatggaattcgtggcaatccgcgaa
aaccagcgtctggaggcgatccgcgatgccgcactgctgcagcagcatcctggcgaggca
ttcggtgcgtcgatccagcagatcatcaccccggaattcgtgcgcgaggaaatcgcccgc
ggccgtgcggtgctgcccaacaacatcaatcacccggaaagcgagccgatgatcatcggc
cgcaacttcctgactaagatcaacgccaacatcggcaacagcgcggtgtcctcgggcatt
gcagaggaagtggaaaagctggtgtgggcgatccgctggggcggcgacacggtgatggac
ctgtcaaccggcaagcacatccatgaaacgcgcgaatggatcatccgcaattcgccggtg
gcgatcggtacggtgccgatctaccaggcgctcgagaaggtcgacggccgcgccgaagcg
ctgacctgggagattttccgcgacaccctgatcgaacaggcagagcagggcgtggactac
ttcaccatccatgccggggtactgctgcgctatgtgccactcaccgccaggcgtgttacc
ggcatcgtcagccgcggcggttcgatcatggccaagtggtgcctggcccaccacaaggaa
aacttcctttacacccatttcgaagacatctgcgaaatcatgaaggcctacgacgtgacc
ttctcgctgggtgacggcctgcgtcctggctgcatcgccgatgccaacgatgcggcgcag
ttcggcgagctggagacgctgggcgagttgacgaagattgcgtggaagcacgacgtgcag
accatgatcgaaggccccggccatgtgccgatgcagctgatcaaggagaacatggacaag
cagctgcgcgagtgcggcgaggcgccgttctacacgcttggcccgctgaccaccgacatc
gcaccggggtacgaccacatcaccagcgcgatcggtgcggcgatgatcggttggttcggc
actgccatgctctgctacgtcacgccgaaggagcatctgggcctgcccaaccggcaggac
gtgcgcgacggcatcatggcctatcgcatcgccgcccatgctgctgacctggccaagggg
catccgggggcgcaggtgcgtgacaacgcgctgagcaaggcacgcttcgaattccgctgg
gaagaccagttccacctcggcctggacccggagaaggccaaggaattccacgacgagacc
ctgcccaaggacgcgcacaagctggcccacttctgttcgatgtgcggcccgcatttctgt
tcgatgaagatcacccaggacgtgcgcgagtacgccgagaagggcatgcaggaaaagtcc
gagcagttccgggcggccggcgccgaggtgtaccagcagggctga
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