Stenotrophomonas indicatrix: DAIF1_35680
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Entry
DAIF1_35680 CDS
T07128
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sinc01011
]
DAIF1_35680 (rlpA)
Enzymes [BR:
sinc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DAIF1_35680 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sinc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DAIF1_35680 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
FtsK_4TM
Motif
Other DBs
NCBI-ProteinID:
QBR45981
LinkDB
All DBs
Position
complement(3945943..3947181)
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AA seq
412 aa
AA seq
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MNIRWLVPGLIVLALAACSSAPKKPATAGHGGKPSGTVVQGKGGRPAHCPEGSPYAAATE
DLSTRGNYTAGGLYKPGVKDTTPSYVPNVACIPEPVVTNEDRSAIGNKSPYVVLGKQYKV
LDDTRNYVERGTASYYGAKFHGRLTSNREVYDMYQFTAAHKTLPLPSFARVTNLDNGESV
IVRVNDRGPFHDGRVVDLSYAAAVRLGITQRGTGNVEVRAVQPGETNLMAQKPSRRERRA
AEAATAAVASARPAPAARAVADSDIDRLVKRLPADAAPERGQPATTQAAVSTMPEVAVSS
LPPSAPASRPAAPVVATAMPRGPAPASSPSLSQKVVGAVMLQVASFSNRDNANRAMGQLN
AAGIVGATISDIAAGGRTLWRLRVPASDHASAAELAGRISGLGFGSPQIVKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagatggctggtccctggattgatcgtcctcgcgctggccgcctgcagcagc
gcgccgaaaaagccggcgaccgccggccacggtggcaagccgtccggcacggtggtgcag
ggcaagggtgggcgtccggcgcattgtccggagggctcgccgtacgcggcggccaccgag
gacctgtccacccgtggcaactacaccgccggtggcctgtacaagcccggcgtgaaagac
accacgcccagttacgtgcccaacgtggcctgtattcccgagccggtggtgaccaatgag
gaccgctcggcgatcggcaacaagtcgccctacgtggtgctgggcaagcagtacaaggtg
ctcgacgacacccgcaactacgttgaacgcggcaccgcttcgtactacggcgccaagttc
catggccgcctgacctccaaccgcgaggtctacgacatgtaccagttcaccgctgcgcac
aagaccctgccgctgcccagcttcgcccgcgtgaccaacctggacaacggcgaatcggtg
atcgtgcgcgtcaatgatcgtggcccgttccacgatggccgcgtggtcgatctcagttac
gccgccgctgtgcgcctgggcatcacccagcgcggtaccggcaacgtggaagtgcgcgca
gtgcagccgggtgaaaccaacctgatggcgcagaagccgtcgcgccgcgaacgccgtgct
gctgaagcggctaccgctgccgttgccagcgcacgccccgcacccgccgcacgtgcggtt
gccgacagcgacatcgatcgactggtcaagcgcctgccggccgacgccgcgcccgagcgc
ggccagccggctaccacccaggccgctgtcagcacgatgccggaagtggcggtcagcagc
ctgccgcccagcgcacccgcgtcgcgtccggcagcgccggtcgtggccaccgccatgccg
cgcggcccggccccggccagcagccccagcctgtcgcagaaggtggtgggcgcggtgatg
ctgcaggtcgccagcttctccaaccgcgacaacgccaaccgggcgatgggccagctcaac
gctgccggcatcgtcggtgccaccatcagcgacatcgctgccggtggtcgtaccctgtgg
cgcctgcgggtacccgccagcgaccatgccagcgcggcggaacttgccgggcgcatctcg
ggtctgggctttggctcgccacagatcgtcaaggactga
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