Stenotrophomonas indicatrix: DAIF1_36000
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Entry
DAIF1_36000 CDS
T07128
Symbol
dcsC
Name
(GenBank) O-ureido-serine racemase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00300
Lysine biosynthesis
sinc00470
D-Amino acid metabolism
sinc01100
Metabolic pathways
sinc01110
Biosynthesis of secondary metabolites
sinc01120
Microbial metabolism in diverse environments
sinc01230
Biosynthesis of amino acids
Module
sinc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DAIF1_36000 (dcsC)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DAIF1_36000 (dcsC)
Enzymes [BR:
sinc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DAIF1_36000 (dcsC)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QBR46013
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Position
complement(3980407..3981258)
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AA seq
283 aa
AA seq
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MSKAGTNGLRFSKMHGAGNDFVVIDLRDGTPPPTPELAARLADRHTGVGCDQILTIEPPR
AEGSVASYRIWNADGSNSEQCGNGARCIAAWLVREGSAQGDRFVIDSPLASHAVDVLGDG
QYAVAMGVPLFDPAQVPLIGFAHPREEYLLPLQGETVRFAAVSMGNPHAVIEVGLVDAAP
VERVGGLLQQHASFPKSVNVGFAQVMGPEHVRLRVFERGVGETLACGSGACAAAVTLMHR
GRLQRDARISLPGGDLRIQWPGDGQPVVMAGPTAFVFEGEWIA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccggtaccaacggtctgcgcttcagcaagatgcacggcgcgggcaacgat
ttcgtagtgatcgacctgcgcgacggcaccccgccgcccaccccggaactggccgcgcgc
ctggccgaccgccataccggcgtcggctgcgaccagatcctgaccatcgagccgccgcgc
gccgaaggctccgtcgcctcttaccgcatctggaacgccgatggttccaattccgagcag
tgcggcaacggcgcgcgctgcatcgcggcctggctggtgcgcgagggcagtgcgcagggc
gaccgcttcgtcatcgacagcccgctggccagccatgccgtggatgtcctcggcgatggc
cagtacgcggtggcgatgggcgtgccgctgttcgatccggcgcaggtgccgctgatcggc
ttcgcccacccgcgcgaggagtacctgctgccactgcagggtgagaccgtgcgcttcgcg
gcggtgtcgatgggcaatccgcacgcggtgattgaagtgggcctggtcgatgccgcaccg
gtcgagcgcgtgggcggactgctgcagcagcatgcctcgttcccgaagtcggtgaacgtg
ggcttcgcccaggtaatgggcccggaacatgtgcgcctgcgcgtgttcgagcgcggcgtc
ggtgaaaccctggcctgcggcagtggcgcctgcgcggcggcagtgaccctgatgcatcgc
ggccgcctgcagcgcgatgcgcgcatcagcctgcctggtggcgacctgcgcatccagtgg
ccgggcgatggccagccggtggtgatggcgggcccgaccgcattcgtcttcgaaggggag
tggatcgcatga
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