KEGG   Stenotrophomonas indicatrix: DAIF1_37940
Entry
DAIF1_37940       CDS       T07128                                 
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sinc  Stenotrophomonas indicatrix
Pathway
sinc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sinc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DAIF1_37940 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sinc03400]
    DAIF1_37940 (ung)
Enzymes [BR:sinc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     DAIF1_37940 (ung)
DNA repair and recombination proteins [BR:sinc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DAIF1_37940 (ung)
 Prokaryotic type
     DAIF1_37940 (ung)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: QBR46205
LinkDB
Position
complement(4177946..4178671)
AA seq 241 aa
MIDEVVDTPAIQLEPSWKQRVGDYLLQPQMRELSSFLRQRKASGAAVFPPGPQIFAAFDA
TPFDQVKVVILGQDPYHGRGQAHGLSFSVQPGVPVPPSLLNIYKEIEGDLGIARPDHGCL
IPWAQRGVLLLNAVLTVEEGKAGAHQGRGWEGFTDHVVDVLNREREGLVFMLWGAYAQQK
GKVIDTGRHRVLKAPHPSPLSAHRGFLGCRHFSMANEYLQRRGQAPIDWSLPPRAMLASS
G
NT seq 726 nt   +upstreamnt  +downstreamnt
atgatcgatgaagtagtggacaccccggcgatccagctggaaccgagctggaaacagcgt
gtgggcgattacctgctgcagccgcagatgcgcgagctgtccagcttcctgcggcagcgc
aaggccagcggtgcggcggtgttcccgcctggaccgcagatcttcgccgccttcgatgcg
accccgttcgatcaggtgaaagtggtcatcctcggccaggacccgtaccacggccgtgga
caggcccatggcctgagtttctcggtgcagccgggcgtgccggtgccgccgtcgttgttg
aacatctacaaggaaatcgagggtgacctcggtattgcccgcccggaccacggctgcctg
atcccgtgggcgcagcgcggcgtgctgctgctcaacgcggtgctgacggtggaagagggc
aaggccggtgcgcaccaggggcgcgggtgggaaggcttcaccgaccatgtggtggacgtg
ttgaaccgtgagcgcgagggcctggtgttcatgctctggggtgcctacgcgcagcagaag
ggcaaggtgatcgataccggccgccaccgcgtgctgaaagccccgcatccctcgccgctg
tcggcccaccgcggcttcctcggctgccgtcatttctcgatggccaacgagtacctgcag
cgccgcgggcaggcgccgatcgactggtcgctgccgccgcgggcgatgctggcgtcatcg
ggctga

DBGET integrated database retrieval system