Stenotrophomonas indicatrix: DAIF1_39640
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Entry
DAIF1_39640 CDS
T07128
Symbol
srlR
Name
(GenBank) glucitol operon repressor
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sinc03000
]
DAIF1_39640 (srlR)
Transcription factors [BR:
sinc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
DAIF1_39640 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
DprA_WH
HTH_Mga
MarR_2
MarR
PaaX
FaeA
HTH_5
HTH_AsnC-type
HTH_24
HTH_23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QBR46371
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All DBs
Position
4373728..4374504
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AA seq
258 aa
AA seq
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MRNTRSRRQQILQLLIEHGSVQVADLVERFGVSAVTIRADLTHFESQGLATRTHGGATLV
RTPPQEQDIHEKDALNLPLKDSIGTAAARLVQAGDNIIIDSGSTTMTLARHLREHRDVTV
MTNGLNIAWELANAAGITVLLTGGLLRQQSLSLQGSQAEASLNSYSFDTLFLGVDGLDLQ
FGLTTHDEAEARLNHRMVERARRIVVLTDASKFGRVSLHRIARLDQIHAIITDAGIDDAT
REGLQRLGIEVIIAEPPA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacacccgctcccgccggcaacagatcctgcagctgctgatcgagcacggctcg
gtgcaggtggccgatctggtcgagcgcttcggcgtgtcggcggtgaccatccgtgccgac
ctgacccacttcgaatcgcaggggctggccacgcgtacccacggtggtgccaccctggtg
cgtacaccgccgcaggaacaggacatccacgaaaaggatgcgctgaacctgccgctgaag
gactccatcggcacggcggccgcgcgcctggtgcaggccggtgacaacatcatcatcgac
tccggctccaccacgatgaccctggcccgccatctgcgcgaacaccgcgatgtgacggtg
atgaccaacggcctgaacatcgcctgggaactggccaacgccgccggcatcaccgtgttg
ctgaccggcggactgctgcgccagcaatcgctgtcgctgcagggcagccaggccgaagcc
agtctcaactcctacagtttcgacacgctgttcctgggcgtggatggcctggacctgcag
ttcggcctgaccacccacgacgaagccgaagcccgcctcaaccaccgcatggtcgaacgc
gcgcggcgcatcgtggtgctcaccgacgcctccaaattcggacgcgtcagcctgcaccgc
atcgcccgcctcgatcagatccacgccatcatcaccgacgccggcatcgacgacgcgacc
cgcgaggggctgcagcggctgggcatcgaagtgatcatcgccgagccccccgcatga
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