Stenotrophomonas indicatrix: DAIF1_40280
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Entry
DAIF1_40280 CDS
T07128
Symbol
rluE
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinc03009
]
DAIF1_40280 (rluE)
Enzymes [BR:
sinc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
DAIF1_40280 (rluE)
Ribosome biogenesis [BR:
sinc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DAIF1_40280 (rluE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QBR46434
LinkDB
All DBs
Position
complement(4439285..4439824)
Genome browser
AA seq
179 aa
AA seq
DB search
MLIAFNKPFNVLCQFTDRSVPPRPTLAGFGLPPRVYAAGRLDHDSEGLLLLTDNGTLAHK
LTDPKHKADKLYWVQVEGTPSEGQLQQLRDGVVLNDGPTLPAKIERLDPAPELWPRDPPV
RFRKTVPDSWLAITIREGRNRQVRRMTAAVNLPTLRLVRAAMGPYRLDDLQPGQWRQIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgccttcaacaagccgttcaacgtgctctgccagttcaccgaccgcagcgtg
ccgccgcggccgacattggccggcttcggtttgccgccgcgcgtctacgctgccggccgc
ctcgaccatgacagtgagggcctgctgctgctgaccgacaacggtacgctggcgcacaag
ttgaccgacccgaagcacaaggcggacaaactctactgggtgcaggtggaaggcacgccc
agcgaagggcagctgcagcagctgcgcgatggcgtggtgctcaatgatgggccgacgctg
ccggcgaaaatcgagcgcctcgatcctgcgcctgaactgtggccgcgcgatccgccggtg
cgcttccgcaagacggtgcccgacagctggctggcgatcacgatccgcgaggggcgtaac
cgccaggtgcggcggatgaccgctgcggtgaacctgccgacgctgcgcctggtacgcgct
gcaatggggccgtaccggctggatgacctgcagcccgggcagtggcggcagatcggctga
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