Stenotrophomonas indicatrix: DAIF1_41660
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Entry
DAIF1_41660 CDS
T07128
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAIF1_41660 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_41660 (recD)
Enzymes [BR:
sinc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DAIF1_41660 (recD)
DNA repair and recombination proteins [BR:
sinc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAIF1_41660 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
UvrD_C
SLFN-g3_helicase
MoxZ
nSTAND3
T2SSE
Mg_chelatase
NTPase_1
AAA_28
AAA_16
NACHT
AAA_25
DEAD
Herpes_Helicase
ATPase
AAA_29
SRP54
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QBR46561
LinkDB
All DBs
Position
complement(4599866..4601746)
Genome browser
AA seq
626 aa
AA seq
DB search
MNLLRDLHRSGQLRTLDHALAISLKRLREDTPDDVALAAALASLAVAQGHAGFDPRQPQR
VIDGIPAWPEPAQWLAQLQASPWVATPQDAGAAAAEAPLVLENGLLYLRRYREYERQLAV
GLQRIGRHPLPAPDMAAVAPLFARLFPHAATGEDHQARAAGVTLRHPLALVTGGPGTGKT
TTIARLLLLLAAQAQHQGLPVPKVALAAPTGRAAERMAESLRLAVQRLQEQGLDPALCTA
LPSTGTTLHRLLGVIPDSPRFRHHADNPLPVDVVVVDEASMIDLPLMAKLVDAIASGTRL
ILLGDPDQLPSVEAGDVLSAILRASGDGIGTRADDAQALHGLLAAATLQPQAPPRAFAGR
RVQLQRGYRQSDALDLAPLAQAVRGGDSGTALRLLRSGGLAGVRFHEGEADPLRGQREHL
LDHWRALADAVDPAQALQQAGRLRVLTALREGPQGARGLNSRIEQLLAGNTPGYFQGRLL
LITENSYRHRLFNGDIGICLRDGSGAMVAWFPGETADQPRAFHPAALPAHESAFAMTVHK
AQGSEFDEVWLQLPRQDSRVLSRELVYTGLTRARQRLQVAGSAEVLEAALKRHASRLGGL
AWRLGAEEVTEEPARCEEPTVQGTLF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctgcgcgatctgcatcgcagtggccagctgcgcaccctggaccacgccctg
gccatcagcctcaagcgcctgcgcgaggacacgccggacgacgtggcactggccgccgca
ctggcctcgctggccgtggcgcaggggcacgctggcttcgatccgcgccagccccagcgc
gtgatcgatggcattccggcatggcccgaacctgcgcagtggctggcgcagctgcaggcc
tcgccctgggtggcgaccccgcaggatgccggcgccgccgccgcggaagcgccgctggta
ctcgagaacggtctgctgtacctgcgccgctaccgcgaatacgagcggcagttggctgtc
ggcctgcaacgcatcggccgccatccgctgcctgcaccggacatggccgcggtggcgccc
ctgttcgcgcgtctgttcccgcacgccgcaaccggtgaggaccaccaggcccgtgcggct
ggcgtaaccctgcgccacccgctggccctggtcaccggtggtcccggtaccggcaagacc
accaccatcgcccgcctgctgctgctgttggcggcacaggcgcagcaccagggcctgccc
gtgccgaaggtagcgttggccgcacccaccggccgcgctgccgagcgcatggccgaaagc
ctgcgcctggccgtacagcggctgcaggagcaggggctggacccggcgctgtgcaccgcg
ctgcccagcacaggcaccaccctgcatcgcctgctcggcgtgattcccgattcaccgcgc
ttccgccatcacgccgacaatccgttgccggtggacgtggtggtggtcgacgaagcttcg
atgatcgacctgccgctgatggccaagctggtcgacgcgatcgccagcggtacccgcctg
atcctgctcggcgatcccgaccagttgccgtcagtggaagccggtgatgtgctcagcgcc
atcctgcgcgccagcggcgatggcatcggcacccgtgccgacgatgcgcaggcgctgcat
ggactgctggcagcggcgacgctgcagccgcaggcaccgccgcgcgcgttcgcaggccgc
cgcgtgcagttgcagcgtggctaccggcagagtgatgcgctggacctggcgccgctggcg
caggccgtgcgtggcggtgacagtggtaccgccctgcgcctgctgcgcagtggcgggctg
gctggtgtccgcttccatgaaggcgaggcggacccgttgcgtggccagcgcgagcatctg
ctcgaccactggcgcgcactggccgacgcagtggacccggcgcaggcactgcagcaggcc
ggccgcctgcgcgtgttgaccgcactgcgcgaaggcccgcagggcgcgcgtggcctcaac
agccgcattgaacagctgctggctggcaacaccccgggctacttccagggccggctgctg
ctgatcaccgaaaacagctaccgccaccgcctgttcaacggcgatatcggcatctgcctg
cgcgatggcagcggtgcgatggtggcctggttccccggcgagaccgccgaccagccgcgc
gccttccacccggcagcgttgcccgcacacgagagcgcgttcgcgatgaccgtgcacaag
gcgcagggctcggagttcgatgaggtgtggttgcagctgccgaggcaggacagccgcgtg
ctgtcgcgcgaactggtctacaccggcctgacccgcgcccgccagcgcctgcaggtggcc
ggcagcgccgaggtgctggaggcggcattgaaacgacatgccagccgccttggtgggttg
gcgtggcgactgggtgcggaagaggtgaccgaggaaccggcgcgctgcgaagaacccacc
gtgcagggcacgttgttctaa
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