Stenotrophomonas indicatrix: DAIF1_41680
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Entry
DAIF1_41680 CDS
T07128
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAIF1_41680 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_41680 (recC)
Enzymes [BR:
sinc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DAIF1_41680 (recC)
DNA repair and recombination proteins [BR:
sinc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAIF1_41680 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBR46563
LinkDB
All DBs
Position
complement(4605414..4608755)
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AA seq
1113 aa
AA seq
DB search
MSDPGSDFRLYHSNSLDVLAALLARNVRVPVPGQPLLAPEVVLIPQVAMRRWLQATLAAE
YGVAANLEFLTPGEFVARALNANVEGEADDLDAAALHWRLYQALRDPQLLAQPPMRALQS
YLAGGDALKPWALAGELASVFEKYQAWRRDWLLRWEAGADAADPQAILWRSIAAGHGYRA
RRIQAYLDRFEGTGQPLPQGLPPRMSAFATLNISPDVLRVMATQSRVGELHFYLPTPVQS
YWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGAAGRDFMAVLGSYEVVHPAGEIAAYS
DPEQDTRPTMDQGGLSDSLLHRLQRDLFHRRALPSGELRDGLRSDDPSLQVHACHTRLRE
LQVLHDQLRSLLQDPRFDPPLQAREIAVLAPDIDPYVPYLEAVFGGRGGEDEHIPYALAD
SSPLAGEPLADVFVHLLGLPISRFGLNEVLDLLASAPLAEAAGLEAVDFDRLHGWLQQAG
ARWGLDAQHRDQLQAPSDDAYTWQFALDRLLLGHATGSEVDLVGVAPWIELEGGALDALD
RLLRLLRVLAVYQRRLGELLTPAQWRQRLLSLLDALLPTPPSSPNSQRALERLRKLLNQF
AEDAYKAGFADGVPPEVVRAHFAGALAEADTRAPLLTGGISFGRMVPMRLLPFRVICVLG
LNDGDFPRRDPAVGLNQLTAELDTPRRRPGDRSTREDDRFLFLQLFAAAQDVFYLSYLGA
DPRDGSVREPSVLVSELIDAAAAYHLDPSTVTRDFTVRHALQPFSPAAFGDGDPRRFSYR
RQWHPAAGRLGGQRGGLLPWFDAALPPPVDDAVEEEVSLESLRRFLCDPAGQFLAQSLGL
RLADDVEDVDDLEPLVLSSRGPEKRGVQLAVVQATLAGDSEPLYPRLRARGLLPSGILGE
RQFEVERLKTRPYATAMLGWLQGTPLESRRYEVEIDGVRLHGRVGDRHPEGLVRLRAGAL
NGNAVIRQGLDWLLANAAGDALPLVQFYDGGDAGPGPHALPALTVPAARAALRALLQLRQ
RGLREPLRFAPYTGWVLFNAPVEKQRSEGWKQWHGSDRSWGEANSDAWQLLLRGADPFAD
DASYADLLRNSQVVFSAVREGRSFGNDPQAGHA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccgggcagcgacttccgcctctaccattccaattcgctggacgtgctggct
gccctgctggcgcgcaacgtgcgtgtgccggtgccgggacagccgctgctggcgccggag
gtggtgctgatcccgcaggtggcgatgcggcgctggctgcaggcgacactggctgccgag
tatggcgtggccgccaacctggaattcctgacccccggtgagttcgtcgcccgtgcgttg
aacgccaatgtcgagggagaagccgacgacctggacgcggccgccctgcactggcgcctg
taccaggccctgcgcgatccgcagctgctggcgcagccaccgatgcgcgcgctgcagtcc
tatcttgccgggggcgacgcgctcaaaccctgggccttggccggcgaactggcctcggtg
ttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgggaagccggcgccgat
gcggccgatccgcaggccatcctgtggcgcagcatcgccgccggccatggttaccgcgcg
cgccgcatccaggcgtacctggaccgcttcgagggcaccggccagccgctgccgcagggc
ctgccgccgcggatgtcggcgttcgccaccctcaacatctcgcccgacgtactgcgggtg
atggccacccagtcgcgggtgggcgaactgcatttctatctgcccacgccggtgcagtcc
tactggggcgacctgcagaccctggcagagcgcctgcgcagcggtgcgccggacccgttc
ggcgaggccgccggcgagaaccgcctgctggaagcgtggggtgcggccggccgcgatttc
atggcggtgctgggcagctatgaagtggtgcatccggccggcgagatcgcggcctattcc
gacccggagcaagacacgcggccgacgatggaccagggcgggctgtccgacagcctgctg
catcgcctgcagcgcgacctgttccaccgtcgtgccttgccttccggtgaactgcgcgat
ggcctgcgcagcgacgacccgagcctgcaggtgcacgcctgccacacccgcctgcgcgag
ctgcaggtgctgcacgaccagctgcgcagcctgctgcaggacccgcgcttcgacccgccg
ttgcaggcgcgcgagatcgccgtgctggcgccggacatcgatccgtacgtgccctatctg
gaagcggtgttcggcggacgggggggcgaggacgaacacattccctacgcgctggccgac
agcagtccgttggctggcgagccgctggccgacgtgttcgtgcacctgcttggcctgccg
atttcgcgcttcggcctgaacgaggtgctggatctgctggccagtgcacccctggccgag
gccgccggcctggaagcggtggacttcgaccgactgcatggctggctgcagcaggcaggc
gcacgctggggcctggatgcccagcatcgcgaccagctgcaggcccccagcgatgacgcc
tacacctggcagttcgcgctggatcgcctgctgctgggccacgccaccggcagcgaggtg
gatctggtcggggtggcgccgtggatcgaactggaaggcggggcgctggacgcgctggac
cggctgctgcgcctgctgcgcgtgctggccgtctaccagcgccggctgggcgaactgttg
accccggcacagtggcggcagcgcctgctgtcgctgctcgatgccctgctgccgacacca
cccagctcgcccaacagccagcgcgcgctggagcgcctgcgcaagctgctcaaccagttc
gccgaagatgcgtacaaggccgggttcgccgatggcgtgccaccggaggtggtgcgtgcg
cacttcgccggtgcgcttgccgaggccgatacgcgcgcgccgttgctgaccggtggcatc
agcttcggccgcatggtgccgatgcgcctgctgccgttccgggtgatctgcgtgctcggc
ctcaacgatggtgatttcccgcgtcgcgacccggccgttggcctcaaccagctcaccgcc
gaactggatacgccgcgccgccgtcccggcgaccgctccacccgcgaagacgatcgtttc
ctgttcctgcagctgtttgctgctgcgcaggacgtgttctacctcagctacctcggcgcg
gacccgcgcgatggcagcgtgcgcgaaccctcggtgctggtcagcgaactgatcgatgcc
gccgcggcctatcacctcgatccgtcgaccgtcacgcgggacttcaccgtgcgccacgcg
ctgcagccgttctcgccggccgccttcggtgacggcgacccacgccgcttcagctaccgc
cggcagtggcacccggccgccgggcggctgggcgggcagcgcggcggcctgctgccgtgg
ttcgacgccgcactgccgccgccggtggacgacgcggtggaagaagaggtctcgctggag
agcctgcgtcgtttcctgtgtgatccggccgggcagttcctcgcgcaatcgctgggcctg
cgcctggccgacgacgtcgaggacgtcgacgacctggagccgctggtgctgtcctcgcgt
gggccggagaagcgcggtgtgcagttggccgtggtgcaggccaccctggccggtgacagc
gagccgctgtacccgcggctgcgcgcacgcgggctgctgccgtcgggcatcctcggcgag
cgccagtttgaagtggagcggctcaagacccgcccgtatgccacggccatgctgggctgg
ttgcagggcacgccgctggagagccgccgctatgaagtggagatcgacggcgttcgcctg
catggccgggtcggtgatcgtcatcccgaaggcctggtgcgcctgcgcgccggcgccctc
aatggcaacgcggtgatccgccaggggctggactggctgctggccaacgccgccggcgat
gccttgccgctggtgcagttctacgacggcggtgatgccggccccggcccgcatgcattg
cctgccttgaccgtgcccgcagcacgcgcggcattgcgcgcgctgctgcagctgcgccag
cgtgggctgcgcgaaccactgcgctttgcgccctataccggctgggtgctgttcaacgcg
ccggtggaaaagcagcgcagcgaaggctggaaacaatggcatggcagcgaccgcagctgg
ggtgaagccaacagtgatgcctggcagctgctgctgcgtggcgccgacccgttcgccgac
gacgccagttacgccgacctgctgcgcaacagccaggtggtcttcagcgccgtgcgcgaa
gggcgcagcttcggcaatgatccacaggcgggccacgcatga
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