Sesamum indicum (sesame): 105155383
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Entry
105155383 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase RING1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105155383
04121 Ubiquitin system [BR:
sind04121
]
105155383
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105155383
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105155383
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105155383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-Nse
Anti-TRAP
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
105155383
NCBI-ProteinID:
XP_011069557
UniProt:
A0A6I9SKJ1
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All DBs
Position
LG2:complement(5266307..5268063)
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AA seq
373 aa
AA seq
DB search
MSSTPPPNVTGGNGNRDFNLYWCYQCHRTVRIASDNPSGVVCPRCSGRFLYEIDMSRPRP
VLEFTAFDPSPEARILEALALMLDPPLGAGSRTPRTHPGPDLAQIRINGRGRHRRRDSEE
AGNGGWFRARRRNSSLFDEDLQEAGNRSWFRPRRRNSLFDEDSDGWGPESGILARPRTWI
ILRPVRPPPAGPNLPRERLVPPGVDPRNYFTGPGLQELIEELTQNDRPGPPPAPDSVINA
IPTIKVGPNHLQTDSECPVCKEEFKVGMEARELPCNHIYHPDCIIPWLRLHNSCPVCRHE
LTVPCEDREIESGERSSESHDEGSREQQQRCWRLRQLANLWPFRSRYRPLQSHSNGAATP
RHRAAESWRCTIL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacccctcctcccaatgtaactggtggtaatggcaacagagacttcaacctc
tactggtgttaccaatgccatcgaaccgtcagaattgcatctgacaatccctccggggtt
gtctgccctcgctgctccggccggtttctgtatgaaattgacatgtcaaggccccgcccc
gttcttgaattcactgcatttgatccctctcccgaggcccgaattctggaagctttggct
ctcatgcttgatcctccgcttggagctggatcgcgcactcctagaacccatccgggcccg
gatttggcccaaatacggatcaatgggcggggaagacaccgccgacgggactcggaagaa
gctggaaatggtggctggtttcgggccagaaggagaaactcgagtttgtttgatgaggac
ttacaagaggctggaaaccgaagctggtttcggcccaggaggaggaatagtttgtttgac
gaggacagcgatggttggggtcctgaaagtgggattctagcccggcccagaacttggatc
atccttcggcccgtacgtcccccacctgcaggccccaatctacctcgagaaaggctagtc
ccaccgggtgtggaccctcgaaactacttcaccgggccaggattgcaagaactcattgaa
gaactgactcagaatgacaggcccggccccccaccagcacctgattcagtaatcaatgct
attcccacgattaaagttggcccaaaccatttgcaaacggactcggagtgtccagtttgt
aaggaagaattcaaagttgggatggaagcaagagagctgccctgcaaccacatctaccat
cctgattgcatcatcccgtggctgaggctccacaattcttgccctgtctgccgccatgag
ctcacagtcccatgtgaagatcgggagatcgagtcgggtgagaggtctagtgaatctcat
gatgaaggaagcagggagcagcagcagaggtgttggcggctgaggcagctggccaatttg
tggcccttcaggtccaggtatcggccacttcagtcacacagcaatggggctgccacccca
cgtcaccgcgcagctgaatcatggaggtgtactattctttaa
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