Sesamum indicum (sesame): 105155410
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Entry
105155410 CDS
T04135
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105155410
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105155410
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF4135
Motif
Other DBs
NCBI-GeneID:
105155410
NCBI-ProteinID:
XP_011069588
UniProt:
A0A6I9SJV2
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Position
LG2:5952157..5954227
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AA seq
401 aa
AA seq
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MAINFITILLFLPLLAINVNAQGPMTYDITKYGAKSGGDISQALMDAWKEACNSTSPSTI
VIPRGTWSLSQVKLLGPNKAPLELQVQGILQANPNPGQLPNKEGEWITINYVNYFTLSGG
GVFDGQGQQAWKQNDCHKNRNCAKLPMNLSFNFVNNSIIRDVTTKDSKNFHVNCIGSHNV
TFLRFTVSAPGDSPNTDGIHLGRDTMINIKDSIIKTGDDCVSIGDESKEIHIQNVTCGPG
HGISVGSLGGYAEEKDVQGIFVTNCTFIGTQNGVRVKTWPSAPAQLTVSDLHFEDLIMDN
VSSPIIIDQEYCPHNLCKKDRPSSIKISNVSIKNVRGTTNSAEAVTLICSGLKPCENVEV
GDIDLTYNGNQGPITTKCMNVKPKFVGKQNPPVCATTAKSA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaacttcattacaattctcttatttttgcctttgttggcaataaatgttaac
gctcaggggcccatgacatatgatatcacaaagtatggtgcaaaatctggtggagatatc
agtcaggctctaatggacgcttggaaggaggcatgcaattcaacttccccaagcacaata
gtgataccacgaggaacctggtctcttagtcaagtgaaattattaggccccaataaggct
cctctcgagcttcaagtccaaggaatcttgcaagccaatcctaatcccggtcaattgcct
aataaagaaggtgaatggattactatcaattatgtcaattatttcaccctatcaggtggt
ggagtatttgatggtcaaggacaacaagcctggaagcaaaacgattgccacaaaaataga
aattgtgccaagcttcccatgaatcttagcttcaatttcgtcaacaactccataattcgt
gatgtgaccacgaaagatagcaagaatttccacgtgaattgtatagggagccataatgtg
acgttcctccgattcacagtttcagcgccaggagatagcccaaacactgatggtatccat
ctgggtcgtgacacgatgatcaatatcaaagattccatcataaaaacaggagatgattgt
gtctcaattggagacgagtccaaagaaattcacatccaaaatgtaacttgtggtccagga
cacggtattagcgttggaagtcttggtggttatgcagaagaaaaggatgtgcaggggata
tttgtgacaaactgcaccttcattggcacacaaaatggcgtcagggtgaagacatggccc
tctgccccagcacagttgactgttagtgatttgcattttgaagatttaatcatggataat
gttagcagtcccattatcattgatcaagaatattgtccacacaatctttgcaaaaaagat
agaccatcgtctatcaagattagcaacgtcagcattaagaatgtacggggcacgacaaat
agtgcagaggcggtgacgcttatttgtagtggtcttaagccatgcgagaatgtagaggtg
ggtgacattgatcttacatataatggaaatcaaggtcctatcaccaccaaatgcatgaat
gtcaaacccaaatttgtcggcaagcagaatccaccagtgtgtgccactactgccaagtct
gcttaa
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