Sesamum indicum (sesame): 105155756
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Entry
105155756 CDS
T04135
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105155756
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105155756
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
WASH_WAHD
CTK3
POL2_thumb
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
105155756
NCBI-ProteinID:
XP_011069995
UniProt:
A0A6I9SJH1
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Position
LG2:10868816..10877452
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AA seq
535 aa
AA seq
DB search
MDEDAFNEDLLTEKLSKLNSSQQSIESLSRLCVSHRKRAKQIVETWETLFKSAPREQRVS
FLYLANDILQNSRRKGSEFVNEFWKVLPTALKGVYDGGDENCRKVASRLVDIWEERKVFG
SRGQNLKIELLGKNPSPDQNASPANNAKNSNPIKVLKRDANSLRIKLAVGGLPEKILTAF
QLVHEEIVNEEAALNKCQDTVSRVREIEKDVLNVSSQGNLLGSDVVDNMQQQENMLQQWI
SQLEKFEAIRVALISQLREALQDQESKVELIRSELLVARGQIEQAANTRLKATSISAAPP
STNQVTVDPTFPPPLPTNNPTMTPPAHPLTSFVNSTISEEEGKRAAAAAMAAKLTASTSS
AQMLTSVLSSLVAEEAASMTSGLKRPKLEKPMVFPDANNSGGANSGYFPASTQSVPQVNP
LQAPFLPPPPPPPLAPPCNSPANQLVQSTMMGLPFGYGPSNLPPPLSSNVGMGFARPGPP
PHQAQPQAQNQQQQSQQLQPPQSQQLPANGGYYRSVGVGFYGQSHQPPTPPIHRQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatgctttcaacgaagatttattgactgaaaagctgtctaaactcaacagt
tctcagcagagcatagaatctttgtcccggttgtgcgtttctcatcgcaaaagggccaag
caaattgttgaaacatgggagacactatttaaatctgcaccacgcgagcaacgagtttcc
tttttatacttggccaatgatatcctgcaaaatagcaggcgtaaaggtagcgaatttgtg
aatgaattctggaaagttcttccgacagctcttaagggtgtttacgatggtggtgatgaa
aattgcagaaaagttgcctccaggctggttgacatatgggaagaaagaaaagtttttgga
tctaggggtcaaaatcttaaaattgaactgcttgggaagaatccttctccagaccagaat
gcttctccagccaataatgcaaaaaattcgaatcccatcaaggttctgaagagagatgcc
aactctttgaggattaaattggctgttggaggtttgcccgaaaaaatcttaactgctttc
cagttggtacatgaagaaattgtcaatgaagaagctgccttaaacaaatgccaagacact
gtttcgcgtgtacgagaaatagagaaagatgttctgaatgtttcatctcaaggaaacctg
ctgggttctgatgttgtagataatatgcagcaacaagagaacatgcttcagcaatggatt
agccaacttgaaaaatttgaggctatcagagttgctttgatttcccagcttagagaagca
cttcaggatcaagaatcaaaggtggagctgattcgcagtgagttacttgtcgcacggggt
cagattgagcaagcagctaatactagactcaaggcaacatcaatctctgcagcaccacca
agcacgaaccaagtaacagttgaccccacctttcctccgcccctgcccacaaacaatccc
accatgacaccacctgctcatcccttgacatcatttgtgaactccacaatcagcgaagag
gagggcaagagggctgcagcagctgccatggccgctaaacttactgcctcaacctcctcc
gcccagatgcttacatctgttctgtcatcccttgtggctgaagaggctgcctcaatgaca
agtggcttgaagcggcccaagttggagaaacccatggtttttcctgatgccaacaattct
ggtggagctaattcaggctattttcctgccagcacacaatctgtaccccaggtgaaccca
ttgcaggccccattcctcccacctccacctccaccaccgcttgcacctccgtgtaattcc
ccagcaaatcagttggtccaatctacaatgatggggcttccatttggctatggtccgagc
aacttacctcctcctctgtcttcgaatgttggcatgggatttgctcgcccgggccctcca
ccccatcaagcacagccgcaggcgcagaaccagcaacagcagtcacagcaactacagcct
ccgcaatcacagcagcttccagcaaatggtggatactacaggtcagtaggtgtcggattt
tatgggcaaagccatcagccccctaccccgcccatacacaggcaatga
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