KEGG   Sesamum indicum (sesame): 105155793
Entry
105155793         CDS       T04135                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105155793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105155793
   03036 Chromosome and associated proteins [BR:sind03036]
    105155793
Spliceosome [BR:sind03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105155793
 Complex B
    105155793
 Complex C
   U2 SnRNP specific factors
    105155793
Chromosome and associated proteins [BR:sind03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105155793
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N
Other DBs
NCBI-GeneID: 105155793
NCBI-ProteinID: XP_011070052
UniProt: A0A6I9SSF4
LinkDB
Position
LG2:complement(11181937..11186583)
AA seq 1257 aa
MDVDTEIQRVKEERQKMEKDLAALTSLTFDTDLYSANKFEGYEQSIPVNDEEDNLDATEN
EIAKKMASFTAPKQFFKEPLRTGEEDEISGFKQPSKIIDREDDYRRRRLNRIISPERNDP
FLDKTPGPEVRTYADVMREEALKRKEEEVKREIAKKKKEEEEAKAKEKDVEKPKKRNRWD
MSQDESAGGKKAKAGSDWDLPDSTPGIGRWDATPTPGRIGDATPSVSRKNRWDETPTPGR
LNDSDATPAGGVTPGATPAGMAWDATPKLGGMATPTPKRQRSRWDETPATMGSATPGATP
AAAYTPGVTPFGAADMATPTPNAIMRSAMTPEQYNLLRWEKDIEERNRPLTDEELDAMFP
QEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYNIPEENRGQQFDVPKELPGGLPFMK
PEDYQYFGSLLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGA
GPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFL
KAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALS
LAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAIYASYYTKE
VMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALDRR
NYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGASDIDARL
EELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKV
RQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMT
KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLK
AHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFT
VLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT
AASAVKHMALGVAGLGCEDALIHLMNYVWPNIFETSPHVINAVMEAIEGMRVALGAAIVL
NYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLEDEENNVFCRPELHMFV
NT seq 3774 nt   +upstreamnt  +downstreamnt
atggatgtagacacagagattcagagggtcaaagaagagaggcaaaaaatggagaaggac
cttgctgcactcacctctctaacctttgatacagatctctatagtgcaaacaagtttgag
ggctatgaacaatccatccccgtgaatgatgaggaagataatttggatgcaactgagaat
gaaattgctaaaaaaatggcatcatttactgctccaaaacagttctttaaggagccctta
agaactggtgaggaggatgagatatctggatttaagcagccaagtaagattattgatagg
gaagatgactaccggaggaggaggttaaataggatcatatctccagagaggaatgatcca
tttttggacaagacgcctgggcctgaagtgagaacttatgctgatgtgatgagggaagaa
gcgctaaagcggaaggaggaggaggtgaagagggagattgcaaagaagaagaaggaagaa
gaggaggcaaaagcaaaggagaaagacgtagaaaagccaaagaagaggaataggtgggat
atgtctcaggatgagagtgctggggggaaaaaggctaaggcagggtctgactgggatttg
cctgactcaacacctggaattgggaggtgggatgcaacccctacacctgggagaattggg
gatgcaacaccatcagtttcaaggaaaaacagatgggatgagactccaactccagggaga
ctgaacgactcagatgcaactcctgctggtggggttacacctggagcaacccctgctgga
atggcttgggatgccacgccgaagctgggagggatggctactccaactcctaaaaggcag
aggtcaaggtgggatgagactcctgccaccatgggcagcgctacaccgggtgctacccct
gctgcagcatatacacccggtgtcactccttttggggctgctgatatggctaccccaact
cctaatgccattatgcggagcgcaatgactcctgagcagtataatttgttgagatgggag
aaggatattgaggaaaggaacaggccattaactgatgaggaactcgatgcaatgtttcca
caagaagggtataagattctagaaccccctgcttcttatgttcctatcagaacccctgct
cggaagcttcttgctacaccaactccaatgggcacacctctgtataatattcctgaagaa
aatcgaggtcagcagtttgatgtgccgaaagagttgcctggtggtttgccatttatgaaa
cctgaggactatcagtactttggttcactgctgaatgaagaaaatgaagaggagttatct
ccagatgagcagaaagagcgaaagatcatgaaactcttgctaaaagttaaaaacggtact
ccacctcagaggaaaactgctttgagacagctcacagataaggcaagggaatttggtgct
ggaccattgtttaaccgtatcctgccacttctcatgcagccaacgttggaagaccaggag
agacacttgttggtaaaagttatcgatagggtactctataagttggatgagttggttcgt
ccatatgttcacaaaattttggtggttatcgagcctctattgattgatgaggattactat
gctcgtgtagaaggtagagagataatctcaaatctgagcaaggcagcagggttggccact
atgattgctgctatgcgtccagacattgataatattgatgagtatgttaggaacaccact
gcaagagcttttagtgttgttgcctctgcccttgggattcctgctttactgccattcttg
aaagctgtctgtcagagtaaaaaatcatggcaagctcgtcacacgggtatcaaaattgtg
cagcagattgcaattttaattgggtgtgccgttcttccccacttgaggtcccttgttgag
ataattgaacacggccttaatgatgaaaatcagaaagtcagaaccatcacggctctgtct
ttggctgcgcttgctgaggctgctgccccatatggtattgaaagctttgactcagtgttg
aagcctttgtggaagggtatcagatcccaccgtgggaaagtcttggctgcttttctgaag
gccattggttttatcataccactgatggatgccatatatgccagctactataccaaggaa
gttatggttattctgattcgtgaattccagtcaccagatgaagaaatgaagaaaattgtg
ctgaaagtggtgaagcagtgtgtgagtacagaaggtgtggaggcggattatatcagaaat
gatattcttccagagttcttccgtaatttctgggtccgaaggatggccttagaccggaga
aattacaagcaacttgttgagacaacagtcgagatagctaacaaagtcggtgttgctgat
atagtaggaagaattgtggaagacctgaaagatgaaagtgagccctatagaaggatggtt
atggagacaattgaaaaagtggttactaacttgggagcatctgatattgatgctcggtta
gaagagttattaattgatggaattctctatgctttccaagagcagaccagtgatgatgcc
aatgttatgcttaatgggtttggtgctgttgtcaactcccttggtcagagagtgaaacca
tatcttcctcagatatgtggtaccataaaatggcggctcaacaataagagtgccaaagtg
aggcaacaagcagcagatcttatatctaggattgctgtggttatgaaacagtgtggagaa
gaacaacttatgggccaccttggtgttgtattgtacgagtatttgggtgaggaataccca
gaggttttgggttcaatattgggtgctctcaaggctattgtgaatgtaattggtatgact
aagatgacaccgcctatcaaggatttgcttcctcggctgactcctatcttgaagaatcgc
catgagaaggtccaagagaattgtatcgatcttgttggaagaattgctgatcgtggggct
gagtttgtccctgcaagggagtggatgagaatatgttttgagcttcttgagatgctcaaa
gcacataaaaagggtatccgtagagcaactgtgaatacttttggttatattgcaaaggct
attgggccacaggatgttctcgcaacattgttaaacaacctcaaggttcaggaacgtcaa
aatcgtgtgtgcacaactgtggccatagcaattgttgcagaaacatgctcaccttttaca
gttctgcctgcattgatgaatgaataccgtgtgcctgagctcaatgttcagaatggtgtt
ctgaagtcactttcttttctgtttgagtacatcggtgagatgggtaaagactacatatat
gcagtaactccattactggaggatgctctcatggacagagatttggttcatcggcaaact
gcagcttctgctgttaagcacatggcgctaggggttgctggtctaggatgcgaggatgct
ttgatccatctgatgaattatgtttggcctaacatttttgagacatccccacatgttatc
aatgcggtcatggaagctattgaaggaatgagggttgcattgggagcagctattgtactg
aactattgtcttcagggactattccatcccgcaaggaaggtcagagaagtgtactggaaa
atctacaattctctctatattggtgcgcaggacgcgcttgttgctgcttatccggtactg
gaggatgaggagaacaatgttttctgcagaccggaattgcatatgtttgtctga

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