Sesamum indicum (sesame): 105155804
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Entry
105155804 CDS
T04135
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105155804
03036 Chromosome and associated proteins [BR:
sind03036
]
105155804
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105155804
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105155804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Spt6_S1
HHH_9
Tex_central_region
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
105155804
NCBI-ProteinID:
XP_011070064
UniProt:
A0A6I9SKY8
LinkDB
All DBs
Position
LG2:complement(11268490..11278051)
Genome browser
AA seq
1642 aa
AA seq
DB search
MAGKTVISDDEDEIGAEEEERDEEPYGDQVDDRDDDEDEEEDEEGQDEYEKDGFIVDDIE
EEEEEEEEDRVDSDEERQKKKKRKKRESERNYVLDEDDYELLQESNISVPRPKLESKKFK
RLKKARRDTEEEPSGLSDEEEFDGSGKGGRTAEEKLKRSLFGDDDGQPLEDIAEEDEQLE
EEDADIGEEDEMADFIVEEEEVDEHGAPVRRKKPKKIRQRPGISSSALQEAHEIFGDVED
LLRIRKLEVRDRFTEVGERSLEDQFDPSILSEKYMTGKDDQIREIDVPERMQISEESTGH
PPTDEISIKMETEWIYNQLVSGIMPLFNKSGATNEEVDDELKRHIARFLELMHVQKLDVP
FIAMYRKEEILSLLKDPNEPEADIENDPNQKPTLKWHKVLWTIQDLDQKWLLLQKRKSAL
QSYYNKRFEEEARRVYDETRLNLNRQLFESITKSLKAADSEREVDDVDSKFNLHFPPGEV
VLDEGQFKRPKRKSHYSICSKAGLWEVASKFGYSSEQFGLQISLEKMRMDELEDAKETPE
EMASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKHVRSIFVDNAVVSTSPTPEGKTA
IDSFHQFAGVKWLRDKPLTRFEDAQWLLIQKAEEEKLLQVTIKLPEVVLDKLISDSNDYY
LSDGVSKSAQLWNEQRKLILHDAFYNFLLPSMEKEARSLLTSRAKTWLLWEYGKLFWDKV
SVSPYQRKENDIGSDEDTAPRVMACCWGPGKPATTFVMLDSAGEVLDVLHAGSLNLRGQS
VNEQQRKKNDQQRVQKFMMDHQPHVVVLGAANLSCTRLKEDIYEIIFKMVEDNPRDVGHE
MDNLNIVYGDESLPHLYENSRISVDQLPSQEGIIRRAVALGRYLQNPLAMVATLCGPARE
ILSWKLNPLENFLTPDEKYGMIEQVMVDVTNQVGLDLNLATSHEWLFAPLQFISGLGPRK
AASLQRSLVRAGAIFTRKDLLTSHGLGKKVFINAVGFLRVRRSGLTSSSSQFIDLLDDTR
IHPESYSLAQDLAKDIYREDGNDDANDDDDVLEMAIEHVREKPHLLRAVDVHEYAEQKNR
LNKKETLNDIRLELMEGFQDRRRPYVEPSQDEEFYMISGETEEALSEGRIVQATVRRVQA
QRAICVLESGLTGMLSKEDYTDDWRDINELTDKLREGDILTCRIKSIQKNRYQVFLTCRE
SEMRNNRFQNHRNMDPYYHEERSTVHTEQEKARKEKELAKKHFKPRMIVHPRFQNITADE
AIEFLSDKDPGESVIRPSSRGPSFLTLTLKVYDGVFAHKDIVEGGKEHKDITSLLRIGKT
LKIGEDTFEDLDEVMDRYVDPLVAHLKGMLNYRKFRRGTKTEVDELLRIEKAENPMRIVY
CFGISHEHPGTFILTYIRSSNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPHD
SAPSIRSVAAMVPMRSPATGGSSGFGGGWGGSSDGGWRGSQSVDRDRGSGRSGRGDYRNG
DGHGAPRPYGGRGRGRGRGSYGGGRGDRQDSDRSSQKWGSKDGDNGGWGNFPGAKVQNSP
GRDALPGSWGSGGGGGSSGGGGDVADGGGSGWSSWGQGDAAAGTGSGSAEAAAGNSGWGG
GSNSKKSSQGDDGEWGGGGGGW
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaaaactgtgatctccgatgacgaagatgaaattggagcggaggaagaagag
agagatgaggagccctatggagaccaagtggatgaccgcgacgacgatgaggatgaagaa
gaagatgaagaaggacaagatgagtatgagaaagatggatttatagtggacgatattgag
gaagaagaggaagaggaggaagaagaccgagttgatagtgatgaggagaggcagaaaaaa
aagaaaaggaagaaaagggagtcggagaggaactatgtgcttgatgaggatgattatgaa
ctactccaggaaagcaacatctctgttcctcgtccaaaacttgaaagtaagaagtttaag
cgactgaaaaaggctcggagggacacggaagaagagccctctgggctttctgatgaagag
gagtttgatggaagtggaaaaggcgggcgtacagctgaggagaagcttaaacgcagcttg
ttcggcgatgatgatggacaaccacttgaggatattgctgaggaggatgaacagctggaa
gaagaggatgcagacataggtgaggaggatgaaatggctgattttattgttgaagaagaa
gaagttgatgaacacggagctcccgtgaggaggaagaagcccaagaagatcaggcaacgc
ccaggaatttcttcgtctgcacttcaggaagcacatgaaatatttggtgatgtagaagac
ctcttgagaatacgaaagttggaagtaagggacaggtttactgaagttggtgaaaggagc
cttgaggatcagtttgatcctagtatactttctgagaagtatatgactggaaaggatgac
cagattcgagaaatagacgtccctgaaagaatgcagatatctgaggaaagcactggtcat
cccccaacagatgagattagcatcaaaatggagacggagtggatatacaatcaacttgtt
agtggcatcatgccattgttcaacaagagtggtgctacaaatgaagaagtagatgatgaa
ctcaagcggcatattgcaagatttctggagttaatgcacgtacagaaattggatgttcct
ttcattgccatgtaccggaaagaggagattttgagcctattaaaggatccaaatgagcct
gaagctgacatcgaaaatgatcctaaccagaaacctacgctcaagtggcacaaggtgctt
tggacaatccaggacttggatcaaaagtggcttcttcttcagaaaagaaagagtgcactc
cagtcgtactacaataagcggttcgaagaagaggctcgaagagtatatgatgagacacgc
ctcaatttaaatcgtcagctttttgaatcaatcactaagtcgctgaaggctgctgattca
gaaagagaggttgatgatgtagattcgaaatttaacttgcacttccccccaggcgaagtt
gtcctagatgaagggcagtttaagaggccgaagaggaaatcacattacagcatttgcagt
aaagctggactgtgggaggttgcgagcaaatttggttatagctcagaacaatttggtttg
cagatttctctcgagaaaatgcggatggatgaattggaggatgcaaaggaaacaccagag
gaaatggcttctaatttcacctgtgcgatgtttgagacacctcaagctgtattgaaaggc
gcaaggcacatggcagctgttgagattagctgtgaaccatgtgtccggaaacatgtccgc
agtatcttcgtggataatgctgtagtgtcaactagtccaacgcctgagggaaaaacagct
attgattcttttcaccagtttgctggagtgaagtggctacgggacaagccacttaccaga
tttgaggacgcacagtggcttctgattcagaaggctgaagaggagaagctcttgcaagtt
accatcaagctgcctgaagtagtccttgataagttaatcagtgactcaaacgactattat
ctgagtgatggtgttagtaaatctgctcaattatggaacgaacagaggaagttaatactt
catgatgcattttataattttcttctaccttcaatggaaaaggaagcgagatcactgttg
actagtagagcaaaaacctggttgctctgggaatatggaaagctgttttgggataaagtt
tctgtttcaccatatcagcggaaggaaaatgatattggctcagatgaagatactgctccc
agggttatggcatgctgttggggtcctggaaagccagctactacttttgtgatgctggat
tcagccggagaagttttagatgtacttcatgccggttccctcaatctccgtggtcaaagt
gttaatgaacagcagcggaagaaaaatgatcagcagcgagtgcaaaaatttatgatggac
caccaaccacatgttgttgttctaggtgcagctaatttgtcttgtacacgactgaaggag
gatatttatgagatcatcttcaagatggtggaagataatcccagagatgttggtcacgag
atggataatctgaatattgtctatggtgatgaatctcttccacatctatacgagaattct
cgaatatcagttgatcagcttccttcacaagaaggtattattaggcgtgctgtggctctt
ggacggtatcttcagaatccactagctatggttgccacattatgtggaccagctagggag
atattatcttggaaacttaatcctttggagaactttcttactcctgatgagaagtatggg
atgattgagcaagttatggtggatgttacgaaccaagttggtcttgatttaaatttggct
accagccatgaatggttgtttgctcctctgcaatttatatctgggcttggacccagaaaa
gcagcttctctgcaaaggtcgctagtaagagcaggagccattttcaccaggaaagacctg
ttgacatcccatggtcttggtaaaaaggtttttattaatgctgttgggttcctgcgtgtc
cgacgcagcgggttgacttccagcagtagtcaatttattgatctgttagatgacactaga
atacatccagaatcttacagccttgcacaagatttggccaaggatatttaccgggaggat
ggcaatgatgatgcaaatgatgatgatgatgtgctggaaatggctattgaacatgtgaga
gagaagcctcatctattgagggccgtggatgttcatgaatatgctgaacagaaaaaccgc
ctgaacaaaaaggaaacccttaatgacataagattggagttaatggaaggctttcaggat
cggcgcagaccatatgttgaaccaagtcaggatgaggagttttacatgatctcaggagag
actgaagaagctctctctgaaggaagaattgtgcaagcaacagttcgcagggtgcaagct
cagagagcgatttgcgtccttgaatctggattgactggcatgcttagcaaggaagattac
acagatgactggagggatatcaatgaattaactgataagctgcgtgaaggggatatctta
acttgcagaatcaaatcaatccagaagaatcgctatcaagtgtttttaacatgtcgagaa
agtgaaatgaggaataaccgtttccagaaccatcgaaatatggatccatactatcatgaa
gaacgcagcactgtgcatactgagcaggaaaaagctcgtaaagagaaggagctagccaag
aagcattttaagccaaggatgattgttcaccctcgcttccagaatataacagctgatgaa
gcaatagagtttttgtcggacaaggatcctggcgaaagtgttatacgtcctagttctcgt
ggaccttcatttctgactttaactctgaaagtatatgatggggtatttgctcacaaggac
atagttgaaggtggaaaagaacacaaggatatcacaagcttgcttcgaataggcaagaca
cttaaaattggagaggatacatttgaagatcttgatgaggttatggatcggtatgtggat
ccattggtagctcatttgaagggaatgctaaattaccgcaagtttaggaggggtactaaa
actgaagttgatgagctcctcagaattgaaaaagctgagaatccaatgagaatagtgtat
tgctttggaatatctcatgaacatcctggcacattcattctgacttatatacgaagttct
aatccacatcatgagtacataggattgtatccaaagggatttaagttccggaaacgaatg
tttgaggatatagatcgtcttgtggcatatttccagagacatattgatgatccacatgat
tctgcaccttcaattcgatcagttgctgctatggtgccaatgaggagccctgcgactggt
ggctcatctgggtttggtggtggatggggtggttcatctgatggtggctggagaggaagc
cagtcagtggacagagataggggttctgggagatcagggagaggcgattacagaaatggt
gatgggcatggagcacctagaccgtatggtgggcgtggccgagggcgtggccgaggctcg
tatggtggtggcaggggtgacaggcaggactcagaccgcagttcacagaaatggggctct
aaggatggtgacaatgggggatgggggaacttccccggagccaaagtccagaattcacca
ggtagggatgctttgcctggtagctggggaagtggcggtggtggtggcagcagtggtggt
gggggtgatgttgcagatggtggtggtagtggttggagcagctggggacagggagatgct
gctgcgggtactggaagtggcagtgcagaggctgctgcaggtaattcaggatggggtggt
ggtagcaatagcaagaagagttcacagggggatgatggcgaatggggcggaggtggtgga
ggttggtga
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integrated database retrieval system
