Sesamum indicum (sesame): 105156084
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Entry
105156084 CDS
T04135
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105156084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105156084
03036 Chromosome and associated proteins [BR:
sind03036
]
105156084
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105156084
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105156084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
105156084
NCBI-ProteinID:
XP_020547829
UniProt:
A0A8M8UV60
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All DBs
Position
LG2:complement(13730782..13744170)
Genome browser
AA seq
1034 aa
AA seq
DB search
MFGSNPFGQSSSSPFGSQPVFGQTNNANSNPFAPKPFGSTTPFGSQTGGSIFGSMSTGVF
GAQSSSPLGSTSVFGASSSPAFGSSTPTFGAASGSAFGNSSSAFGGSSVFGQKPAFGGFG
SSTTQTSPFGSSFQQSQPAFGNNLFGSSTPFGQPSQPTFGSSSSPAFGAPSTPAFGATST
PAFGSTASPTFGSTGGGFGVSSSPFGSTTPAFGAASTPAFGASSTPAFGATSTPAFGATS
TPAFGATTAPAFGASATPAFGASSTPSFNFGSSPAFGQSTSAFGSSPFGATSSFGAQSSS
FGAQTTTPAFGSPGFGQTAFGGQRGGSRVSPYSPTPETDGATSTQPAGKLESISAMPVYK
DKSHEELRWEDYQLGDKGGPAPAGQATAAVGFGSSGFGSSSTPAFGQSSANPFSSTTSSN
PFAPKTPVFSSPGFGSSSTSAFGSSPFGTSNTSNPFGSTSSTTPSLFGNTTQAFGVNTSP
SLFSSSSTSAFGSPSIFGATATQGTASAFGTGLGFGNTQSSPLFQSTTPTLAQTSSPFGQ
TSSAFGQTAPGFGQSNLFSTPSTGFGGNLFSSTSSLLSNTNTLGFGQTTPSLATPFQSAQ
PAQSSGGFSFSNFGQSQPGASGFGGTPGMFSNNAFGQALGTQSSMVAPQAAPITNPFGTL
PAMPQMSIGRTGTSPSIQYGISSLPQVVEKPVPVRISSLLTSRHLSQRRIRLPVRKYHPK
ADGPKVPFFNDDEETPSTPKADALFVPRENPRALVIRPLEQWPSRSSAEKTKAPSTPLRE
NGKVCQDVYNSINGHGSKDKDVVQTEDSFENGLAKEQVNPTKGNHKANGAHDGLSTEKGD
SYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYFTEPRIQELAAKERAEPGFCRHVKD
FVVGRHGYGSIKFFGETDVRRLDLESLIQFNNREVIVYMDESKKPPVGQGLNKPAEVTLL
NIKCFDKKTGQQYTEGPRIEKYKEMLKRKAEDQGAEFVSYDPVKGEWKFRVNHFSKYKLR
DENETDEIQPGSLS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaagcaacccttttgggcagtcatctagtagcccatttgggtcccaacccgtc
tttgggcagactaataatgctaatagcaacccatttgctcctaaacccttcggtagtaca
accccttttggttcacaaactgggggatccatttttggcagcatgtctactggtgttttt
ggtgctcagtcttcttctcctttaggttccacttctgtctttggtgcttcttcatcacct
gcctttggaagttcaacacctacatttggagctgcctcaggttccgcatttggaaactca
tcttcggcatttggtggttcatcggtgtttgggcagaagcctgcttttggtggttttgga
tctagcaccactcaaacaagtccctttgggagctcatttcagcaatcacaaccagctttt
gggaataatctatttggttcatcaactccttttggacaaccaagtcaacccacatttggt
tcatcgagtagtcctgcatttggtgcaccaagtacacccgcttttggtgctaccagtacc
cctgcctttggttctacagcaagcccaacgtttggtagcacaggtggtggctttggtgtg
tcgagttctccttttggatcaaccactccggcatttggtgcggcttccactccagcattt
ggggcttctagcacgccggcatttggtgctacaagcactcctgcgtttggtgccacaagt
acccctgcatttggtgccacaaccgcacctgcatttggtgcctcagctactccagcattt
ggtgcttcaagtactccgtcttttaactttggatccagtccagcatttggccagtcaact
tctgcatttggaagtagcccatttggtgcgacatcatcttttggagctcaaagttcttct
ttcggagcacagactacgacccccgcttttggtagccctggttttggccagactgctttt
ggagggcaacgagggggaagtagggtgtcaccctactcaccaacacctgagacagatggt
gccactagtacacagccagctgggaaactagaatctatttcagccatgccggtgtacaaa
gataaaagccatgaagaacttagatgggaggactaccagttaggagataaaggagggcca
gctcctgctggtcaggctactgctgctgttggctttggtagttcaggctttggatcctca
tctactcccgcgtttggccaatcatctgcaaatcctttttcatctacaacctcttccaat
ccatttgctccaaaaaccccagtatttagtagtccaggctttggatcttcatccacttct
gcatttggttcttcaccttttggaacatcgaatacatctaacccttttggttcaacatca
tcaacaacgccctccctatttggcaacacaactcaagcatttggagtcaatacctctcct
tctctttttagctcttccagcacatctgcttttggatcaccatctatttttggtgccaca
gcaacacaggggactgcatctgcctttggtactggcttgggttttggcaacactcagtcc
tccccattattccaatcgactacaccaacacttgcacagactagttctccttttggacag
acctcctctgcctttggccaaactgcacctggatttggtcagtcaaatttgtttagtact
ccctcaacaggctttggtggcaatcttttctccagcacttcatcacttctaagtaacacc
aacactttggggtttggtcaaacaactccctctctggctacaccatttcaatctgcacaa
ccggctcagagttctggtggttttagctttagcaactttggtcagtcacaaccaggtgca
agtggctttggcggcacccctggcatgtttagcaataatgcgtttggacaagcgttaggc
acccagagctctatggttgctccacaagcagcccccattacaaatccttttggaactctg
ccagcaatgcctcagatgtctattggtcgcactggcacttctccttctattcaatatgga
atttccagcttgcctcaggtagttgaaaaaccagtgcctgtgagaatatcttcacttttg
acatctcgacacctttctcaacggcgtattaggctgcctgtaaggaaatatcacccaaaa
gccgacggtccaaaggtgccatttttcaatgatgatgaagaaacacccagtacgccaaaa
gcagatgctctctttgttccaagggagaatccaagagctctagtgattcgtccactggaa
cagtggccctctagatccagtgctgagaaaacaaaggccccgagcactccccttcgtgag
aatggcaaagtttgtcaagatgtttacaattccataaatgggcatggctccaaggacaaa
gatgttgtccagactgaagattcctttgaaaatggcctggcgaaggaacaagttaatcct
acaaaaggcaaccataaagcgaatggagcccatgatggtctttctacagaaaaaggagac
tcttacatcactcttacggggcaccgagctggtgaagcagcaatcgtttatgagcatgga
gctgatattgaggcgctgatgccaaagcttcgccattctgattatttcacagagccacga
attcaggagctagcagcaaaggaaagagctgagccaggcttttgccgccacgtgaaggac
tttgtggttgggcgacatggttatggcagcatcaagttctttggggagacagatgtgcgg
aggcttgatctcgagtctcttatccaattcaacaatcgtgaagtgatagtttacatggat
gagagcaagaaacctcctgtcggacaaggtctgaacaaacctgccgaggtaactcttcta
aacataaaatgtttcgacaagaagactggtcagcaatacacagagggaccaagaatagag
aagtacaaggagatgcttaaaagaaaagctgaggatcaaggagctgagtttgtgtcgtac
gatccagtgaaaggggaatggaaattcagagtcaaccatttcagcaagtataagcttcga
gacgaaaatgaaaccgacgaaattcagcctggttctctgagttga
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