Sesamum indicum (sesame): 105156152
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Entry
105156152 CDS
T04135
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105156152
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105156152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
105156152
NCBI-ProteinID:
XP_011070510
UniProt:
A0A6I9SL42
LinkDB
All DBs
Position
LG2:14328314..14336468
Genome browser
AA seq
747 aa
AA seq
DB search
MKREREFIELSEDEWSNHSDSFKPSRILKSEPTSQDPPPPIESFAFSKSVHIIESSSSEE
LGDAAAGNAKGNEFEDLEDEDADLEVSNRVATVSRGNRFVIEDDEDEDDNGDGKVGDFSD
HEVWLSEEEAEEEDVVKKALRKCEKISAELKRELYGTSSAACDRYSEVEMGSSAARIVTQ
EDVNEACGSADLDFKPMLKPYQLIGVNFLLLLYRKKIEGAILADEMGLGKTVQAITYLTL
LKHLEDDPGPHLIVCPASVLENWERELKKWSPSFTVLQYHGSARSAYSKELSSLGKAGLP
PPFDVILVCYSLFERHSAQQKDDRKILRHWKWSCVLMDEAHALKDKNSYRWKNLMSVARN
ARQRLMLTGTPLQNDLHELWSMLEFMMPDLFETGDVDLKKLLNAEDRDLICRMKSILGPF
ILRRLKSDVMQQLVPKMQKVEYVYMAKQQEDAYKEAIENYRATSQARIVKSSETCPHNVA
SILPRRQISNYFLEFRKIANHPLLVRRIYTDDDVVRFAKMLHPKGVFGFECTLERVIEEL
KSYNDFSIHRLLLYYGDADTGILSDKHVMVSAKCRALAELLPVLNRSGSRVLIFSQWTSM
LDILEWTLDVIGVTYRRLDGSTQVTERQTIVDSFNKDTSIFACLLSTRAGGQGLNLTGAD
TVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTVYRLVTKDTVDENIYEIAKRKLILDAAVL
ESGVEVENESEMPDKTMAEILSSLLLQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagagagagaatttatcgaactctcggaggatgaatggtccaaccactctgat
tcttttaaaccctcgcgcatcctgaaatccgaacccacttctcaagaccctcctccccct
attgagtcctttgctttctccaagtccgttcacataatcgagagctcttcttccgaggaa
cttggagatgcggcagctgggaatgcgaaggggaacgaattcgaggatttagaggacgag
gatgctgacttggaggtaagtaatagagttgcgactgtgagtcgggggaatcgtttcgtg
atcgaggacgatgaggatgaggatgacaatggtgatggtaaggtgggtgattttagcgac
catgaggtgtggttgtcggaggaggaagcggaggaggaagatgttgttaaaaaggctctg
cgtaagtgtgagaagatttcggctgagctgaagcgggaattgtacggtacaagctccgca
gcttgtgaccggtactcggaagtggagatgggttcttccgcagcaaggattgtcactcag
gaggatgtaaatgaagcatgtggatctgcggatttggactttaaaccaatgctgaagcca
taccagctcattggagtcaattttcttctgcttttgtatagaaagaaaattgagggagct
atattagcagatgagatgggtcttggaaaaacagtccaggccataacatatctgaccctg
ttgaagcatttggaagatgatcctggtcctcatttaattgtatgtcctgcctctgttttg
gagaactgggaaagggagcttaaaaaatggtctccgtcattcactgttctccaatatcat
ggttctgcacggtcagcttattcaaaagagttgagctctctgggaaaggctgggctgcca
ccgccatttgatgttattcttgtgtgctattcactttttgaacgccacagtgcgcagcag
aaagatgaccgcaaaattcttagacattggaaatggagttgtgtgctaatggatgaagct
catgctttgaaggacaagaatagttacaggtggaaaaatctgatgtcagttgcaagaaat
gcgagacagcgtctgatgcttacaggcacacctttacaaaatgatttgcatgagctgtgg
tcaatgttggagtttatgatgcctgatctttttgaaactggagacgttgacttaaaaaag
ttgttaaatgcagaagatagagatttaatttgtagaatgaagtctattttaggacctttc
atcttaagacgtttaaaatcggatgtgatgcagcagctagttccaaagatgcagaaggtt
gagtatgtatacatggcgaaacaacaagaagatgcttataaagaagcaattgaaaattat
cgtgctacatctcaagctcgtattgtgaagtcttctgaaacttgtcctcataatgttgct
agcatcttgcctcgacgtcaaatttctaattattttcttgagtttcgtaagattgcaaat
caccccttattggttagacgtatctacacagatgatgatgttgttcgttttgctaaaatg
ctgcacccaaaaggtgtattcggctttgaatgtactttggaacgtgtgattgaggagctc
aagagctataatgacttctctattcatcggcttctgctttactatggtgatgctgataca
ggaattctctctgacaaacatgttatggtttcggcgaaatgtcgggcattggctgaactt
ctccctgtgctaaaccgttctggtagtcgtgttcttatttttagccaatggacgtcaatg
cttgacatattggagtggactttggatgtgattggtgtgacttacaggcgccttgatgga
agtacacaggtgacagagaggcagacaattgtggattccttcaacaaggacacttcaata
tttgcatgtttgttgtcaacaagggctggaggacagggtcttaacttgactggagctgat
actgttataattcatgacatggattttaatcctcagattgatcgacaggctgaagatcgc
tgtcatcgcattgggcaaacgaagcctgtcactgtatacaggcttgtgacaaaggataca
gttgatgagaacatttatgagattgcgaaaaggaagctaatattggacgctgcggtgctg
gagtctggagtagaagtcgagaatgaaagtgagatgcccgacaagactatggcagagata
ttatcatctttgttgttgcaataa
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